Skip to content

Commit

Permalink
Update getMolecularConsequences.py
Browse files Browse the repository at this point in the history
  • Loading branch information
rhdolin committed Feb 22, 2024
1 parent 3930e5b commit e5238d3
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions genomics-apps/getMolecularConsequences.py
Original file line number Diff line number Diff line change
Expand Up @@ -199,8 +199,8 @@ def findPathogenicities(variantList, subject, range):


st.title("Get Molecular Consequences")
st.markdown("This app illustrates [FHIR Genomics Operations](http://build.fhir.org/ig/HL7/genomics-reporting/operations.html) find-subject-variants, find-subject-intersecting-variants, \
and find-subject-haplotypes; and the get-feature-coordinates utility. Enter patient and gene in the sidebar and click 'run'. All overlapping simple variants, structural variants, \
st.markdown("This app illustrates [FHIR Genomics Operations](http://build.fhir.org/ig/HL7/genomics-reporting/operations.html) **find-subject-variants**, **find-subject-intersecting-variants**, \
and **find-subject-haplotypes**; and the **get-feature-coordinates** utility. Enter patient and gene in the sidebar and click 'run'. All overlapping simple variants, structural variants, \
and genotypes are returned. Check the compute additional annotations button to calculate annotations for variants that were previously unannotated, concatenate SNVs that are \
in cis into MNVs, and annotate those MNVs.")

Expand Down

0 comments on commit e5238d3

Please sign in to comment.