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CI: Manylinux2014 -> Manylinux_2_28 and update deprecated actions #43

CI: Manylinux2014 -> Manylinux_2_28 and update deprecated actions

CI: Manylinux2014 -> Manylinux_2_28 and update deprecated actions #43

Workflow file for this run

# Perform builds with supported MPI versions
name: MPI
on:
# On pull_requests which mutate this CI workflow, using pr rather than push:branch to ensure that the merged state will be OK, as that is what is important here.
pull_request:
paths:
- ".github/workflows/MPI.yml"
- "tests/test_cases/simulation/test_mpi_ensemble.cu"
- "include/flamegpu/simulation/detail/MPISimRunner.h"
- "include/flamegpu/simulation/detail/AbstractSimRunner.h"
- "src/flamegpu/simulation/detail/MPISimRunner.cu"
- "src/flamegpu/simulation/detail/AbstractSimRunner.cu"
- "src/flamegpu/simulation/CUDAEnsemble.cu"
- "**mpi**"
- "**MPI**"
# Or trigger on manual dispatch.
workflow_dispatch:
defaults:
run:
# Default to using bash regardless of OS unless otherwise specified.
shell: bash
jobs:
build-ubuntu:
runs-on: ${{ matrix.cudacxx.os }}
strategy:
fail-fast: false
# Multiplicative build matrix
# optional exclude: can be partial, include: must be specific
matrix:
# CUDA_ARCH values are reduced compared to wheels due to CI memory issues while compiling the test suite.
cudacxx:
- cuda: "12.0"
cuda_arch: "50-real;"
hostcxx: gcc-11
os: ubuntu-22.04
python:
- "3.8"
mpi:
- lib: "openmpi"
version: "apt" # MPI 3.1
# - lib: "openmpi"
# version: "4.1.6" # MPI 3.1
# - lib: "openmpi"
# version: "4.0.0" # MPI 3.1
# - lib: "openmpi"
# version: "3.0.0" # MPI 3.1
# - lib: "openmpi"
# version: "2.0.0" # MPI 3.1
- lib: "openmpi"
version: "1.10.7" # MPI 3.0
- lib: "mpich"
version: "apt" # MPI 4.0
# - lib: "mpich"
# version: "4.1.2" # MPI 4.0
# - lib: "mpich"
# version: "4.0" # MPI 4.0
# - lib: "mpich"
# version: "3.4.3" # MPI 3.1
- lib: "mpich"
version: "3.3" # MPI 3.1
config:
- name: "Release"
config: "Release"
SEATBELTS: "ON"
VISUALISATION:
- "OFF"
# Name the job based on matrix/env options
name: "build-ubuntu-mpi (${{ matrix.mpi.lib }}, ${{ matrix.mpi.version }}, ${{ matrix.cudacxx.cuda }}, ${{matrix.python}}, ${{ matrix.VISUALISATION }}, ${{ matrix.config.name }}, ${{ matrix.cudacxx.os }})"
# Define job-wide env constants, and promote matrix elements to env constants for portable steps.
env:
# Define constants
BUILD_DIR: "build"
FLAMEGPU_BUILD_TESTS: "ON"
# Conditional based on matrix via awkward almost ternary
FLAMEGPU_BUILD_PYTHON: ${{ fromJSON('{true:"ON",false:"OFF"}')[matrix.python != ''] }}
# Port matrix options to environment, for more portability.
CUDA: ${{ matrix.cudacxx.cuda }}
CUDA_ARCH: ${{ matrix.cudacxx.cuda_arch }}
HOSTCXX: ${{ matrix.cudacxx.hostcxx }}
OS: ${{ matrix.cudacxx.os }}
CONFIG: ${{ matrix.config.config }}
FLAMEGPU_SEATBELTS: ${{ matrix.config.SEATBELTS }}
PYTHON: ${{ matrix.python }}
MPI_LIB: ${{ matrix.mpi.lib }}
MPI_VERSION: ${{ matrix.mpi.version }}
VISUALISATION: ${{ matrix.VISUALISATION }}
steps:
- uses: actions/checkout@v4
- name: Install CUDA
if: ${{ startswith(env.OS, 'ubuntu') && env.CUDA != '' }}
env:
cuda: ${{ env.CUDA }}
run: .github/scripts/install_cuda_ubuntu.sh
- name: Install/Select gcc and g++
if: ${{ startsWith(env.HOSTCXX, 'gcc-') }}
run: |
gcc_version=${HOSTCXX//gcc-/}
sudo apt-get install -y gcc-${gcc_version} g++-${gcc_version}
echo "CC=/usr/bin/gcc-${gcc_version}" >> $GITHUB_ENV
echo "CXX=/usr/bin/g++-${gcc_version}" >> $GITHUB_ENV
echo "CUDAHOSTCXX=/usr/bin/g++-${gcc_version}" >> $GITHUB_ENV
- name: Install MPI from apt
if: ${{ env.MPI_VERSION == 'apt' }}
working-directory: ${{ runner.temp }}
run: |
sudo apt-get install lib${{ env.MPI_LIB }}-dev
- name: Install OpenMPI from source
if: ${{ env.MPI_VERSION != 'apt' && env.MPI_LIB == 'openmpi' }}
working-directory: ${{ runner.temp }}
run: |
# Note: using download.open-mpi.org as gh tags aren't pre configured
MPI_VERISON_MAJOR_MINOR=$(cut -d '.' -f 1,2 <<< "${{ env.MPI_VERSION}}")
echo "https://download.open-mpi.org/release/open-mpi/v${MPI_VERISON_MAJOR_MINOR}/openmpi-${{ env.MPI_VERSION}}.tar.gz"
wget -q https://download.open-mpi.org/release/open-mpi/v${MPI_VERISON_MAJOR_MINOR}/openmpi-${{ env.MPI_VERSION}}.tar.gz --output-document openmpi-${{ env.MPI_VERSION }}.tar.gz || (echo "An Error occurred while downloading OpenMPI '${{ env.MPI_VERSION }}'. Is it a valid version of OpenMPI?" && exit 1)
tar -zxvf openmpi-${{ env.MPI_VERSION }}.tar.gz
cd openmpi-${{ env.MPI_VERSION}}
./configure --prefix="${{ runner.temp }}/mpi"
make -j `nproc`
make install -j `nproc`
echo "${{ runner.temp }}/mpi/bin" >> $GITHUB_PATH
echo "LD_LIBRARY_PATH=${{ runner.temp }}/mpi/lib:${LD_LIBRARY_PATH}" >> $GITHUB_ENV
echo "LD_RUN_PATH=${{ runner.temp }}/mpi/lib:${LD_RUN_PATH}" >> $GITHUB_ENV
# This will only work for mpich >= 3.3:
# 3.0-3.2 doesn't appear compatible with default gcc in 22.04.
# 1.x is named mpich2 so requires handling differently
# Uses the ch3 interface, as ch4 isn't available pre 3.4, but one must be specified for some versions
- name: Install MPICH from source
if: ${{ env.MPI_VERSION != 'apt' && env.MPI_LIB == 'mpich' }}
working-directory: ${{ runner.temp }}
run: |
MPI_MAJOR=$(cut -d '.' -f 1 <<< "${{ env.MPI_VERSION}}")
MPI_MINOR=$(cut -d '.' -f 2 <<< "${{ env.MPI_VERSION}}")
[[ ${MPI_MAJOR} < 3 ]] && echo "MPICH must be >= 3.0" && exit 1
echo "https://www.mpich.org/static/downloads/${{ env.MPI_VERSION }}/mpich-${{ env.MPI_VERSION}}.tar.gz"
wget -q https://www.mpich.org/static/downloads/${{ env.MPI_VERSION }}/mpich-${{ env.MPI_VERSION}}.tar.gz --output-document mpich-${{ env.MPI_VERSION }}.tar.gz || (echo "An Error occurred while downloading MPICH '${{ env.MPI_VERSION }}'. Is it a valid version of MPICH?" && exit 1)
tar -zxvf mpich-${{ env.MPI_VERSION }}.tar.gz
cd mpich-${{ env.MPI_VERSION}}
DISABLE_FORTRAN_FLAGS=""
if (( ${MPI_MAJOR} >= 4 )) || ( ((${MPI_MAJOR} >= 3)) && ((${MPI_MINOR} >= 2)) ); then
# MPICH >= 3.2 has --disable-fortran
DISABLE_FORTRAN_FLAGS="--disable-fortran"
else
DISABLE_FORTRAN_FLAGS="--disable-f77 --disable-fc"
fi
./configure --prefix="${{ runner.temp }}/mpi" --with-device=ch3 ${DISABLE_FORTRAN_FLAGS}
make -j `nproc`
make install -j `nproc`
echo "${{ runner.temp }}/mpi/bin" >> $GITHUB_PATH
echo "LD_LIBRARY_PATH=${{ runner.temp }}/mpi/lib:${LD_LIBRARY_PATH}" >> $GITHUB_ENV
echo "LD_RUN_PATH=${{ runner.temp }}/mpi/lib:${LD_RUN_PATH}" >> $GITHUB_ENV
- name: Select Python
if: ${{ env.PYTHON != '' && env.FLAMEGPU_BUILD_PYTHON == 'ON' }}
uses: actions/setup-python@v5
with:
python-version: ${{ env.PYTHON }}
- name: Install python dependencies
if: ${{ env.PYTHON != '' && env.FLAMEGPU_BUILD_PYTHON == 'ON' }}
run: |
sudo apt-get install python3-venv
python3 -m pip install --upgrade wheel build setuptools
- name: Install Visualisation Dependencies
if: ${{ startswith(env.OS, 'ubuntu') && env.VISUALISATION == 'ON' }}
run: |
# Install ubuntu-20.04 packages
if [ "$OS" == 'ubuntu-20.04' ]; then
sudo apt-get install -y libglew-dev libfontconfig1-dev libsdl2-dev libdevil-dev libfreetype-dev
fi
# Install Ubuntu 18.04 packages
if [ "$OS" == 'ubuntu-18.04' ]; then
sudo apt-get install -y libglew-dev libfontconfig1-dev libsdl2-dev libdevil-dev libfreetype6-dev libgl1-mesa-dev
fi
- name: Install Swig >= 4.0.2
run: |
# Remove existing swig install, so CMake finds the correct swig
if [ "$OS" == 'ubuntu-20.04' ]; then
sudo apt-get remove -y swig swig4.0
fi
# Install Ubuntu 18.04 packages
if [ "$OS" == 'ubuntu-18.04' ]; then
sudo apt-get remove -y swig
fi
# Install additional apt-based dependencies required to build swig 4.0.2
sudo apt-get install -y bison
# Create a local directory to build swig in.
mkdir -p swig-from-source && cd swig-from-source
# Install SWIG building from source dependencies
wget https://github.com/swig/swig/archive/refs/tags/v4.0.2.tar.gz
tar -zxf v4.0.2.tar.gz
cd swig-4.0.2/
./autogen.sh
./configure
make
sudo make install
# This pre-emptively patches a bug where ManyLinux didn't generate buildnumber as git dir was owned by diff user
- name: Enable git safe-directory
run: git config --global --add safe.directory $GITHUB_WORKSPACE
- name: Configure cmake
run: >
cmake . -B "${{ env.BUILD_DIR }}"
-DCMAKE_BUILD_TYPE="${{ env.CONFIG }}"
-Werror=dev
-DCMAKE_WARN_DEPRECATED="OFF"
-DFLAMEGPU_WARNINGS_AS_ERRORS="ON"
-DCMAKE_CUDA_ARCHITECTURES="${{ env.CUDA_ARCH }}"
-DFLAMEGPU_BUILD_TESTS="${{ env.FLAMEGPU_BUILD_TESTS }}"
-DFLAMEGPU_BUILD_PYTHON="${{ env.FLAMEGPU_BUILD_PYTHON }}"
-DPYTHON3_EXACT_VERSION="${{ env.PYTHON }}"
-DFLAMEGPU_VISUALISATION="${{ env.VISUALISATION }}"
-DFLAMEGPU_ENABLE_MPI="ON"
-DFLAMEGPU_ENABLE_NVTX="ON"
${MPI_OVERRIDE_CXX_OPTIONS}
- name: Reconfigure cmake fixing MPICH from apt
if: ${{ env.MPI_VERSION == 'apt' && env.MPI_LIB == 'mpich' }}
run: >
cmake . -B "${{ env.BUILD_DIR }}"
-DMPI_CXX_COMPILE_OPTIONS=""
- name: Build static library
working-directory: ${{ env.BUILD_DIR }}
run: cmake --build . --target flamegpu --verbose -j `nproc`
- name: Build python wheel
if: ${{ env.FLAMEGPU_BUILD_PYTHON == 'ON' }}
working-directory: ${{ env.BUILD_DIR }}
run: cmake --build . --target pyflamegpu --verbose -j `nproc`
- name: Build tests
if: ${{ env.FLAMEGPU_BUILD_TESTS == 'ON' }}
working-directory: ${{ env.BUILD_DIR }}
run: cmake --build . --target tests --verbose -j `nproc`
- name: Build tests_mpi
if: ${{ env.FLAMEGPU_BUILD_TESTS == 'ON' }}
working-directory: ${{ env.BUILD_DIR }}
run: cmake --build . --target tests_mpi --verbose -j `nproc`
- name: Build ensemble example
working-directory: ${{ env.BUILD_DIR }}
run: cmake --build . --target ensemble --verbose -j `nproc`
- name: Build all remaining targets
working-directory: ${{ env.BUILD_DIR }}
run: cmake --build . --target all --verbose -j `nproc`