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12 changes: 11 additions & 1 deletion README.md
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Expand Up @@ -46,7 +46,17 @@ In a command-prompt type `pip install imagepy`.
~~On Windows you currently need to first install shapely using conda.~~ This should also work for windows, now that shapely is available via pip.
Once installed, ImagePy can be run by typing `python -m imagepy` in a command prompt.


#### An Example of Installation on Ubuntu 22.04.3

```Bash
git clone https://github.com/Image-Py/imagepy.git
cd imagepy
sudo apt-get install libsdl2-2.0-0 libwxgtk3.0-gtk3-dev libwxgtk3.0-gtk3
pip install -U -f https://extras.wxpython.org/wxPython4/extras/linux/gtk3/ubuntu-22.04 wxPython
pip install shapely pystackreg vispy -i https://pypi.tuna.tsinghua.edu.cn/simple
pip install -r requirements.txt -i https://pypi.tuna.tsinghua.edu.cn/simple
python -m imagepy
```

## Citation：
[ImagePy: an open-source, Python-based and platform-independent software package for bioimage analysis](https://academic.oup.com/bioinformatics/article/34/18/3238/4989871)
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