Two main scripts can be used:
drd1Colocalization.mwhich will do colocalization analysis on a set of DAPI, DRD1 and TDT images.drd1ColocalizationRandomShift.mwhich will do the same as above, except it will do so over a set number of random trials within which the TDT image will be randomly translated. In both cases,doMaskcan be toggled to perform the analyis with or without masking of DAPI with DRD1.
Output results are saved in a /tifs/ directory.