NSForest CLI

A command-line bioinformatics tool scaffolded using template-python.

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🛠 Features

• Python 3.11
• Typer-powered CLI
• Conda + Docker compatible
• CI with GitHub Actions
• Auto-generated Sphinx docs

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🚀 Getting Started

Install via Conda or use Docker:

conda env create -f environment.yml
conda activate nsforest
# OR
docker build -t nsforest .
docker run -it nsforest

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💡 CLI Usage

nsforest --help

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🧪 Run Tests

pytest tests/

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📄 License

MIT License © NIH/NLM