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bioquant
Sarah Haynes edited this page Nov 8, 2019
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Sequence-based protein reports using a clustering approach to assemble a high-level report.
philosopher bioquant [flags]
--id
UniProt proteome ID for retrieving annotation features.
--level
clustering identity level (default 0.9)
Cluster all reported proteins with at least 85% identity level:
philosopher bioquant --level 0.85
Cluster all reported proteins and retrieve annotation data from UniProt:
philosopher bioquant --id UP000005640