Upgrading the actions version,LTS version of node

.github/workflows/interface_test.yml

@@ -15,14 +15,14 @@ jobs:
 
     strategy:
       matrix:
-        node-version: [12.x, 14.x]
+        node-version: [16.x, 18.x]
 
     steps:
     - name: Checkout repository
-      uses: actions/checkout@v2
+      uses: actions/checkout@v3
 
     - name: Set up Node.js ${{ matrix.node-version }}
-      uses: actions/setup-node@v1
+      uses: actions/setup-node@v3
       with:
         node-version: ${{ matrix.node-version }}
 
@@ -33,4 +33,4 @@ jobs:
       run: npm test -- --coverage
 
     - name: Upload coverage to Codecov
-      uses: codecov/codecov-action@v1
+      uses: codecov/codecov-action@v3

.github/workflows/linter.yml

@@ -12,10 +12,10 @@ jobs:
 
     steps:
       - name: Checkout Code
-        uses: actions/checkout@v2
+        uses: actions/checkout@v3
 
       - name: Lint Code Base
-        uses: docker://github/super-linter:v3
+        uses: github/super-linter@v4
         env:
           PYTHON_PYLINT_CONFIG_FILE: .pylintrc
           VALIDATE_ALL_CODEBASE: false

.github/workflows/py_tests.yml

@@ -23,10 +23,10 @@ jobs:
 
     steps:
       - name: Checkout Code
-        uses: actions/checkout@v2
+        uses: actions/checkout@v3
 
       - name: Set up Python 3.7
-        uses: actions/setup-python@v2
+        uses: actions/setup-python@v4
         with:
           python-version: 3.7
 
@@ -40,8 +40,8 @@ jobs:
       - name: Set-up the project
         run: |
               docker-compose up -d postgres
-              docker-compose run --rm bety initialize
-              docker-compose up -d
+              docker-compose up -d bety
+              docker-compose up -d 
               docker ps -a
               docker logs betydb-yaba_yaba_api_1
 
@@ -51,4 +51,4 @@ jobs:
               pytest --cov= ${{ matrix.path }} --cov-report=xml
 
       - name: Upload coverage to Codecov
-        uses: codecov/codecov-action@v1
+        uses: codecov/codecov-action@v3

app/Dockerfile

@@ -1,14 +1,25 @@
 FROM python:3.7.2-slim
 
+RUN apt-get update && apt-get install -y \
+    git \
+    sudo \
+    libpq-dev \
+    python-dev
+
+RUN adduser --disabled-password --gecos '' myuser && \
+    chown -R myuser:myuser /usr/local/lib/python3.7/site-packages && \
+    echo "myuser ALL=(ALL) NOPASSWD: ALL" >> /etc/sudoers
+
 COPY . /code
 
 WORKDIR /code
 
-RUN apt-get update && apt-get install -y \
-    git
-
 RUN pip install git+https://github.com/aleju/imgaug --no-deps &&\
+    pip install GDAL\
+    export PATH=/usr/bin/gdal-config:$PATH\
+    pip install Fiona\
     pip install -r requirements.txt    
 
+USER myuser
 
 CMD ["python","server.py"]

app/requirements.txt

@@ -8,5 +8,5 @@ jsonschema==3.2.0
 Flask==1.0
 Werkzeug==0.15.3
 SQLAlchemy==1.3.0
-geopandas==0.5.0
+geopandas==0.6.1
 PyYAML==5.4

docker-compose.yml

@@ -49,7 +49,7 @@ services:
       - 6001:6000
     depends_on:
       - yaba_api
-  
+
   yaba_visualization:
     build: ./visualization
     networks:
@@ -60,16 +60,16 @@ services:
     environment:
       - HOST=0.0.0.0
       - PORT=8075
-         
+
     ports:
       - 8008:8075
     depends_on:
       - postgres
     restart: unless-stopped
-    
+
   yaba_interface:
     build: ./interface
-    networks: 
+    networks:
       - bety
     volumes:
       - './interface:/code'
@@ -88,5 +88,6 @@ services:
 volumes:
   postgres:
 
+
 networks:
-  bety:
+  bety: