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Executable linked to elastix.lib, offering subset of elastix.exe functionality #230

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Executable linked to elastix.lib, offering subset of elastix.exe functionality #230

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@N-Dekker N-Dekker commented Mar 2, 2020

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N-Dekker commented Mar 2, 2020

Note: This is work in progress (WIP). Not ready yet to be merged onto the develop branch!!!

@N-Dekker N-Dekker mentioned this pull request Aug 25, 2020
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@N-Dekker N-Dekker force-pushed the ElastixLibBasedExe branch 3 times, most recently from 47da687 to 104c4c4 Compare December 11, 2020 14:59
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With the last force-push, 42 "elastix_run" tests passed successfully:

elastix_run_example_OUTPUT
elastix_run_3DCT_lung.example_OUTPUT
elastix_run_3DCT_lung.NC.translation.ASGD.001_OUTPUT
elastix_run_3DCT_lung.NC.euler.ASGD.001_OUTPUT
elastix_run_3DCT_lung.NC.affine.ASGD.001_OUTPUT
elastix_run_3DCT_lung.NC.bspline_r.ASGD.001a_OUTPUT
elastix_run_3DCT_lung.SSD.bspline.ASGD.001_OUTPUT
elastix_run_3DCT_lung.MI.bspline.ASGD.001_OUTPUT
elastix_run_3DCT_lung.NMI.bspline.ASGD.001_OUTPUT
elastix_run_3DCT_lung.NC.bspline.ASGD.002_COMPARE_OVERLAP
elastix_run_3DCT_lung.NC.bspline.ASGD.002_COMPARE_LANDMARKS
elastix_run_3DCT_lung.NC.bspline.ASGD.002_COMPARE_TP
elastix_run_3DCT_lung.NC.bspline.ASGD.003_OUTPUT
elastix_run_3DCT_lung.NC.bspline.ASGD.004_OUTPUT
elastix_run_3DCT_lung.NC.bspline.ASGD.004b_OUTPUT
elastix_run_3DCT_lung.NC.bspline.SGD.001_OUTPUT
elastix_run_3DCT_lung.NC.bspline.QN.001_OUTPUT
elastix_run_3DCT_lung.MI.bspline.SGD.001_OUTPUT
elastix_run_3DCT_lung.MI.bspline.SGD.002_OUTPUT
elastix_run_3DCT_lung.MI.bspline.SGD.003_OUTPUT
elastix_run_3DCT_lung.MI.bspline.SGD.004_COMPARE_OVERLAP
elastix_run_3DCT_lung.MI.bspline.SGD.004_COMPARE_LANDMARKS
elastix_run_3DCT_lung.MI.bspline.SGD.004_COMPARE_TP
elastix_run_3DCT_lung.SSD.bspline.ASGD.002_OUTPUT
elastix_run_3DCT_lung.SSD.bspline.ASGD.003_OUTPUT
elastix_run_3DCT_lung.SSD.bspline.ASGD.001-Threads1_OUTPUT
elastix_run_3DCT_lung.SSD.bspline.ASGD.001-Threads2_OUTPUT
elastix_run_3DCT_lung.SSD.bspline.ASGD.001-Threads4_OUTPUT
elastix_run_3DCT_lung.NC.bspline.ASGD.001a-Threads1_OUTPUT
elastix_run_3DCT_lung.NC.bspline.ASGD.001a-Threads2_OUTPUT
elastix_run_3DCT_lung.NC.bspline.ASGD.001a-Threads4_OUTPUT
elastix_run_3DCT_lung.MI.bspline.SGD.001-Threads1_OUTPUT
elastix_run_3DCT_lung.MI.bspline.SGD.001-Threads2_OUTPUT
elastix_run_3DCT_lung.MI.bspline.SGD.001-Threads4_OUTPUT
elastix_run_3DCT_lung.NC.bspline.ASGD.001a_OUTPUT
elastix_run_3DCT_lung.NC.bspline.ASGD.001b_OUTPUT
elastix_run_3DCT_lung.NC.bspline.ASGD.001c_COMPARE_OVERLAP
elastix_run_3DCT_lung.NC.bspline.ASGD.001c_COMPARE_LANDMARKS
elastix_run_3DCT_lung.NC.bspline.ASGD.001c_COMPARE_TP
elastix_run_3DCT_lung.NC.bspline.ASGD.001d_COMPARE_OVERLAP
elastix_run_3DCT_lung.NC.bspline.ASGD.001d_COMPARE_LANDMARKS
elastix_run_3DCT_lung.NC.bspline.ASGD.001d_COMPARE_TP

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With the last force-push, 42 "elastix_run" tests passed successfully

However, 96 failed:

elastix_run_example_COMPARE_IM
elastix_run_3DCT_lung.example_COMPARE_IM
elastix_run_3DCT_lung.example_COMPARE_OVERLAP
elastix_run_3DCT_lung.example_COMPARE_LANDMARKS
elastix_run_3DCT_lung.example_COMPARE_TP
elastix_run_3DCT_lung.NC.translation.ASGD.001_COMPARE_OVERLAP
elastix_run_3DCT_lung.NC.translation.ASGD.001_COMPARE_LANDMARKS
elastix_run_3DCT_lung.NC.translation.ASGD.001_COMPARE_TP
elastix_run_3DCT_lung.NC.euler.ASGD.001_COMPARE_OVERLAP
elastix_run_3DCT_lung.NC.euler.ASGD.001_COMPARE_LANDMARKS
elastix_run_3DCT_lung.NC.euler.ASGD.001_COMPARE_TP
elastix_run_3DCT_lung.NC.affine.ASGD.001_COMPARE_OVERLAP
elastix_run_3DCT_lung.NC.affine.ASGD.001_COMPARE_LANDMARKS
elastix_run_3DCT_lung.NC.affine.ASGD.001_COMPARE_TP
elastix_run_3DCT_lung.NC.bspline_r.ASGD.001a_COMPARE_OVERLAP
elastix_run_3DCT_lung.NC.bspline_r.ASGD.001a_COMPARE_LANDMARKS
elastix_run_3DCT_lung.NC.bspline_r.ASGD.001a_COMPARE_TP
elastix_run_3DCT_lung.SSD.bspline.ASGD.001_COMPARE_OVERLAP
elastix_run_3DCT_lung.SSD.bspline.ASGD.001_COMPARE_LANDMARKS
elastix_run_3DCT_lung.SSD.bspline.ASGD.001_COMPARE_TP
elastix_run_3DCT_lung.MI.bspline.ASGD.001_COMPARE_OVERLAP
elastix_run_3DCT_lung.MI.bspline.ASGD.001_COMPARE_LANDMARKS
elastix_run_3DCT_lung.MI.bspline.ASGD.001_COMPARE_TP
elastix_run_3DCT_lung.NMI.bspline.ASGD.001_COMPARE_OVERLAP
elastix_run_3DCT_lung.NMI.bspline.ASGD.001_COMPARE_LANDMARKS
elastix_run_3DCT_lung.NMI.bspline.ASGD.001_COMPARE_TP
elastix_run_3DCT_lung.Kappa.bspline.ASGD.001_OUTPUT
elastix_run_3DCT_lung.Kappa.bspline.ASGD.001_COMPARE_OVERLAP
elastix_run_3DCT_lung.Kappa.bspline.ASGD.001_COMPARE_LANDMARKS
elastix_run_3DCT_lung.NC.bspline.ASGD.002_OUTPUT
elastix_run_3DCT_lung.NC.bspline.ASGD.003_COMPARE_OVERLAP
elastix_run_3DCT_lung.NC.bspline.ASGD.003_COMPARE_LANDMARKS
elastix_run_3DCT_lung.NC.bspline.ASGD.003_COMPARE_TP
elastix_run_3DCT_lung.NC.bspline.ASGD.004_COMPARE_OVERLAP
elastix_run_3DCT_lung.NC.bspline.ASGD.004_COMPARE_LANDMARKS
elastix_run_3DCT_lung.NC.bspline.ASGD.004_COMPARE_TP
elastix_run_3DCT_lung.NC.bspline.ASGD.004b_COMPARE_OVERLAP
elastix_run_3DCT_lung.NC.bspline.ASGD.004b_COMPARE_LANDMARKS
elastix_run_3DCT_lung.NC.bspline.ASGD.004b_COMPARE_TP
elastix_run_3DCT_lung.NC.bspline.SGD.001_COMPARE_OVERLAP
elastix_run_3DCT_lung.NC.bspline.SGD.001_COMPARE_LANDMARKS
elastix_run_3DCT_lung.NC.bspline.SGD.001_COMPARE_TP
elastix_run_3DCT_lung.NC.bspline.QN.001_COMPARE_OVERLAP
elastix_run_3DCT_lung.NC.bspline.QN.001_COMPARE_LANDMARKS
elastix_run_3DCT_lung.NC.bspline.QN.001_COMPARE_TP
elastix_run_3DCT_lung.MI.bspline.SGD.001_COMPARE_OVERLAP
elastix_run_3DCT_lung.MI.bspline.SGD.001_COMPARE_LANDMARKS
elastix_run_3DCT_lung.MI.bspline.SGD.001_COMPARE_TP
elastix_run_3DCT_lung.MI.bspline.SGD.002_COMPARE_OVERLAP
elastix_run_3DCT_lung.MI.bspline.SGD.002_COMPARE_LANDMARKS
elastix_run_3DCT_lung.MI.bspline.SGD.002_COMPARE_TP
elastix_run_3DCT_lung.MI.bspline.SGD.003_COMPARE_OVERLAP
elastix_run_3DCT_lung.MI.bspline.SGD.003_COMPARE_LANDMARKS
elastix_run_3DCT_lung.MI.bspline.SGD.003_COMPARE_TP
elastix_run_3DCT_lung.MI.bspline.SGD.004_OUTPUT
elastix_run_3DCT_lung.SSD.bspline.ASGD.002_COMPARE_OVERLAP
elastix_run_3DCT_lung.SSD.bspline.ASGD.002_COMPARE_LANDMARKS
elastix_run_3DCT_lung.SSD.bspline.ASGD.002_COMPARE_TP
elastix_run_3DCT_lung.SSD.bspline.ASGD.003_COMPARE_OVERLAP
elastix_run_3DCT_lung.SSD.bspline.ASGD.003_COMPARE_LANDMARKS
elastix_run_3DCT_lung.SSD.bspline.ASGD.003_COMPARE_TP
elastix_run_3DCT_lung.SSD.bspline.ASGD.001-Threads1_COMPARE_OVERLAP
elastix_run_3DCT_lung.SSD.bspline.ASGD.001-Threads1_COMPARE_LANDMARKS
elastix_run_3DCT_lung.SSD.bspline.ASGD.001-Threads1_COMPARE_TP
elastix_run_3DCT_lung.SSD.bspline.ASGD.001-Threads2_COMPARE_OVERLAP
elastix_run_3DCT_lung.SSD.bspline.ASGD.001-Threads2_COMPARE_LANDMARKS
elastix_run_3DCT_lung.SSD.bspline.ASGD.001-Threads2_COMPARE_TP
elastix_run_3DCT_lung.SSD.bspline.ASGD.001-Threads4_COMPARE_OVERLAP
elastix_run_3DCT_lung.SSD.bspline.ASGD.001-Threads4_COMPARE_LANDMARKS
elastix_run_3DCT_lung.SSD.bspline.ASGD.001-Threads4_COMPARE_TP
elastix_run_3DCT_lung.NC.bspline.ASGD.001a-Threads1_COMPARE_OVERLAP
elastix_run_3DCT_lung.NC.bspline.ASGD.001a-Threads1_COMPARE_LANDMARKS
elastix_run_3DCT_lung.NC.bspline.ASGD.001a-Threads1_COMPARE_TP
elastix_run_3DCT_lung.NC.bspline.ASGD.001a-Threads2_COMPARE_OVERLAP
elastix_run_3DCT_lung.NC.bspline.ASGD.001a-Threads2_COMPARE_LANDMARKS
elastix_run_3DCT_lung.NC.bspline.ASGD.001a-Threads2_COMPARE_TP
elastix_run_3DCT_lung.NC.bspline.ASGD.001a-Threads4_COMPARE_OVERLAP
elastix_run_3DCT_lung.NC.bspline.ASGD.001a-Threads4_COMPARE_LANDMARKS
elastix_run_3DCT_lung.NC.bspline.ASGD.001a-Threads4_COMPARE_TP
elastix_run_3DCT_lung.MI.bspline.SGD.001-Threads1_COMPARE_OVERLAP
elastix_run_3DCT_lung.MI.bspline.SGD.001-Threads1_COMPARE_LANDMARKS
elastix_run_3DCT_lung.MI.bspline.SGD.001-Threads1_COMPARE_TP
elastix_run_3DCT_lung.MI.bspline.SGD.001-Threads2_COMPARE_OVERLAP
elastix_run_3DCT_lung.MI.bspline.SGD.001-Threads2_COMPARE_LANDMARKS
elastix_run_3DCT_lung.MI.bspline.SGD.001-Threads2_COMPARE_TP
elastix_run_3DCT_lung.MI.bspline.SGD.001-Threads4_COMPARE_OVERLAP
elastix_run_3DCT_lung.MI.bspline.SGD.001-Threads4_COMPARE_LANDMARKS
elastix_run_3DCT_lung.MI.bspline.SGD.001-Threads4_COMPARE_TP
elastix_run_3DCT_lung.NC.bspline.ASGD.001a_COMPARE_OVERLAP
elastix_run_3DCT_lung.NC.bspline.ASGD.001a_COMPARE_LANDMARKS
elastix_run_3DCT_lung.NC.bspline.ASGD.001a_COMPARE_TP
elastix_run_3DCT_lung.NC.bspline.ASGD.001b_COMPARE_OVERLAP
elastix_run_3DCT_lung.NC.bspline.ASGD.001b_COMPARE_LANDMARKS
elastix_run_3DCT_lung.NC.bspline.ASGD.001b_COMPARE_TP
elastix_run_3DCT_lung.NC.bspline.ASGD.001c_OUTPUT
elastix_run_3DCT_lung.NC.bspline.ASGD.001d_OUTPUT

@N-Dekker N-Dekker force-pushed the ElastixLibBasedExe branch 2 times, most recently from 197ec89 to 00b4fd0 Compare October 28, 2021 11:58
@N-Dekker N-Dekker force-pushed the ElastixLibBasedExe branch 3 times, most recently from ab619c8 to 6172b61 Compare March 18, 2022 16:17
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