Updated FASTQ validation function to fix issue with some PacBio file … #75
Workflow file for this run
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| name: GitHub Action Apple Silicon Test | |
| #A workflow (github action) that tests installation of itsxpress on Apple Silicon (arm64) using conda | |
| on: [push, pull_request] | |
| jobs: | |
| build: | |
| runs-on: macos-14 | |
| steps: | |
| - name: Install conda | |
| run: | | |
| curl -O https://repo.anaconda.com/miniconda/Miniconda3-latest-MacOSX-x86_64.sh | |
| bash Miniconda3-latest-MacOSX-x86_64.sh -b -p $HOME/miniconda | |
| export PATH="$HOME/miniconda/bin:$PATH" | |
| conda init bash | |
| CONDA_SUBDIR=osx-64 conda create -n itsxpressenv -c bioconda -c conda-forge itsxpress | |
| conda init | |
| source activate itsxpressenv | |
| conda config --env --set subdir osx-64 | |
| conda install biopython | |