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Update kinship plot X label to IBD0

Status: Open.

#61 In UW-GAC/analysis_pipeline;

· amstilp opened on Dec 4, 2024

Integer sample.id must be character

Status: Open.

#60 In UW-GAC/analysis_pipeline;

· wwgordon opened on Jun 13, 2024

Refactor TopmedPipeline.py Cluster classes

enhancement

wontfix

Status: Open.

#55 In UW-GAC/analysis_pipeline;

· amstilp opened on Mar 20, 2023

Add plot of working responses vs linear predictor to null model report

enhancement

Status: Open.

#54 In UW-GAC/analysis_pipeline;

· amstilp opened on Jun 2, 2022

Allow the user to choose which p-value is being plotted for aggregation tests

enhancement

Status: Open.

#53 In UW-GAC/analysis_pipeline;

· amstilp opened on Apr 13, 2022

Residual vs fitted null model report plots are different for glm and GMMAT

Status: Open.

#52 In UW-GAC/analysis_pipeline;

· amstilp opened on Feb 17, 2022

Add null model converged status to null model report

Status: Open.

#51 In UW-GAC/analysis_pipeline;

· amstilp opened on Feb 4, 2022

Recent version of KING not compatibile with king.py

Status: Open.

#48 In UW-GAC/analysis_pipeline;

· wwgordon opened on Sep 9, 2021

Docs: Omit suffix for bed_file

Status: Open.

#47 In UW-GAC/analysis_pipeline;

· wwgordon opened on Sep 7, 2021

Use multiple cores in <code>pca_corr_vars.R</code>

Status: Open.

#40 In UW-GAC/analysis_pipeline;

· amstilp opened on Jan 26, 2021

Optimize uwgac/topmed-master:2.6.0

Status: Open.

#30 In UW-GAC/analysis_pipeline;

· ghost opened on May 18, 2020

Modify thinPoints to handle cases when extreme p-values exist

Status: Open.

#27 In UW-GAC/analysis_pipeline;

· amstilp opened on Mar 30, 2020