Issues

• updated CancerVar/cancervardb

  WGLab/CancerVar#30 · Filter by author TaniaCuppens opened on Apr 8, 2025
  1

• Updating cancervar.out.txt file

  WGLab/CancerVar#29 · Filter by author ShvartsmanIrina opened on Mar 21, 2025

• How is nonmissing_db.npy database obtained?

  WGLab/CancerVar#28 · Filter by author dadaxiaoxiao2333 opened on Feb 26, 2025

• Error: can't read the LOF genes file /home/tud03125/CancerVar/cancervardb/PVS1.LOF.genes

  WGLab/CancerVar#27 · Filter by author tud03125 opened on Dec 1, 2024
  7

• decode entries in Therap_list, Diag_list and Prog_list

  WGLab/CancerVar#26 · Filter by author kythol opened on Jul 2, 2024

• Error: can't read the LOF genes file cancervardb/LOF.genes.exac_me_cancers

  WGLab/CancerVar#25 · Filter by author ajain195 opened on Jun 27, 2024
  1

• Error of opai_predictor.py using evidence-based model

  WGLab/CancerVar#23 · Filter by author kakyungkim opened on Nov 24, 2023
  2

• override default databases with Annovar

  WGLab/CancerVar#22 · Filter by author zoeward-nz opened on Jan 16, 2023

• cancervardb/ for hg38

  WGLab/CancerVar#20 · Filter by author zoeward-nz opened on Jan 8, 2023
  2

• Invalid parameter in configuration file

  WGLab/CancerVar#19 · Filter by author user-tq opened on Nov 3, 2022

• choose the only one transcript for exonic variants

  WGLab/CancerVar#18 · Filter by author user-tq opened on Nov 3, 2022

• 5 prediction tools are used instead of 7

  WGLab/CancerVar#17 · Filter by author jud-b opened on Oct 4, 2022

• Tail end error on CancerVar.py

  WGLab/CancerVar#16 · Filter by author bgold04 opened on Jul 2, 2022
  2

• error using model ensemble

  WGLab/CancerVar#15 · Filter by author evelingonzalezfeliu opened on Jun 2, 2022

• Is it correct to assign EVS5=1 and EVS5=0 to all the variants if I know they are somatic?

  WGLab/CancerVar#14 · Filter by author lincj1994 opened on Aug 27, 2021

• Question about CBP10 in CancerVar web server.

  WGLab/CancerVar#13 · Filter by author lincj1994 opened on Aug 8, 2021
  1

• The input format for CNA data in command-line CancerVar

  WGLab/CancerVar#10 · Filter by author lincj1994 opened on Jul 20, 2021
  2

• https://cancervar.wglab.org/databases/ cant be reached

  WGLab/CancerVar#8 · Filter by author Bicyclecardcn opened on Jul 6, 2021
  3

• difference between CancerVar and VIC?

  WGLab/CancerVar#6 · Filter by author argoat opened on Dec 1, 2020
  5

• Remove unneeded spaces in the header

  WGLab/CancerVar#5 · Filter by author ftucos opened on May 28, 2020

• Where can I obtain hg38_icgc21.txt?

  WGLab/CancerVar#1 · Filter by author CPTPaso opened on Apr 17, 2020
  7