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Add changing permissions to README. #1

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15 changes: 8 additions & 7 deletions README.txt
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Expand Up @@ -5,13 +5,14 @@ WARNING: scitools is still in a development stage - a number of
commands are in active development.

SETUP: To set up scitools, download the repository to the
location you want the executable to be. Keep all index files
and folders within the scitools directory. We recommend adding
the scitools execulable to your path. We also recommend editing the
scitools.cfg file to add in command-line callable executables used
by scitools, defaults assume they are all in your path. Once it is
set up, run 'scitools dependencies' which will check for external
software that scitools relies on.
location you want the executable to be. Then change the
permission of `scitools` using `chmod 755 scitools` command.
Keep all index files and folders within the scitools directory.
We recommend adding the scitools execulable to your path. We
also recommend editing the scitools.cfg file to add in command-line
callable executables used by scitools, defaults assume they are all
in your path. Once it is set up, run 'scitools dependencies' which
will check for external software that scitools relies on.

DESCRIPTION: scitools is a set of scripts designed for working with
single-cell combinatorial indexing data. It includes tools to go from
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