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afloresep/README.md

Alejandro Flores, PhD Student in Chemoinformatics: Big Data and AI at University of Bern

Contact

afloresep01 AT gmail DOT com or connect with me on LinkedIn.

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  1. SPQR SPQR Public

    SPQR (Streaming Product QuantIzation for moleculaR data): Streaming Product Quantization (PQ) for large-scale clustering of molecular data (or other high-dimensional data) to form approximate clust…

    Python 1

  2. Chelombus Chelombus Public

    Process a molecular dataset to compute fingerprints, reduce dimensionality using PCA, and output 3D coordinates along with SMILES strings and any available features.

    HTML 1 1

  3. qligfep qligfep Public

    Forked from qusers/qligfep

    Fork to work existing folder issue and other stuff

    Python 1 1

  4. isostericGP isostericGP Public

    Goal of this repository is designing a bioisosterically aware Kernel for Gaussian Process.

    Jupyter Notebook 1

  5. smiles-rnn-from-scratch smiles-rnn-from-scratch Public

    A minimal, from-scratch RNN/LSTM in NumPy for generating valid SMILES strings using only low-level libraries (NumPy, RDKit). It includes tokenization, manual backpropagation, and an Adam optimizer—…

    Python

  6. chelombus-package chelombus-package Public

    Chelombus python package

    Python 1