chore(deps): bump idc-index-data from 22.1.5 to 23.0.1

[dependabot]

Bumps idc-index-data from 22.1.5 to 23.0.1.

Release notes

Sourced from idc-index-data's releases.

23.0.1

What's Changed

• enh: update to IDC v23 by @​fedorov in ImagingDataCommons/idc-index-data#73

Full Changelog: ImagingDataCommons/idc-index-data@23.0.0...23.0.1

23.0.0

What's Changed

• update to IDC v23 data release
• enh: add missing descriptions by @​fedorov in ImagingDataCommons/idc-index-data#72

Full Changelog: ImagingDataCommons/idc-index-data@22.1.5...23.0.0

Commits

• 810fced enh: update to IDC v23
• 2264f3c enh: add missing descriptions
• See full diff in compare view

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Dependency Update Review: idc-index-data 22.1.5 → 23.0.1 ✅

Summary

Verdict: APPROVE with monitoring recommendation

This is a routine data release update from the NCI Imaging Data Commons (IDC) with low breaking change risk. The major version bump (v22 → v23) reflects the underlying IDC data release version, not an API breaking change.

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Change Details

Dependency: idc-index-data
Version Change: 22.1.5 → 23.0.1
Release Date: November 21, 2025
Type: IDC v23 data release + metadata enhancements

Release Notes:

• v23.0.1 (Nov 21): Update to IDC v23 data release
• v23.0.0 (Nov 21): IDC v23 data release + add missing descriptions
• Commits:
  • 810fced - "enh: update to IDC v23"
  • 2264f3c - "enh: add missing descriptions"

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Risk Assessment

✅ LOW RISK - Data Update, Not API Change

What Changed:

• Data files: Updated Parquet index files reflecting IDC v23 cancer imaging dataset
• Metadata: Added missing collection descriptions
• No API changes: Module interface remains stable

Integration Points (Verified Stable):

# src/aignostics/third_party/idc_index.py uses:
import idc_index_data

# Stable attributes used:
idc_index_data.__version__                          # ✅ Standard attribute
idc_index_data.IDC_INDEX_PARQUET_FILEPATH          # ✅ Stable constant
idc_index_data.PRIOR_VERSIONS_INDEX_PARQUET_FILEPATH # ✅ Stable constant

# Version parsing (adapts to major version):
self.idc_version = f"v{Version(idc_index_data.__version__).major}"  # ✅ Now returns "v23"

Why This is Safe:

1. Data bundle package - Primarily ships Parquet index files, not code APIs
2. No breaking API changes - Release notes mention only "enhancements" and "updates"
3. Semantic versioning reflects data version - v23 = IDC data release v23, not breaking API
4. Stable interface - SDK uses only standard attributes (__version__, file path constants)
5. Version-adaptive code - SDK extracts major version dynamically (v23 from 23.0.1)

📋 Test Coverage

Dataset module tests: 20 tests across 3 files ✅

• tests/aignostics/dataset/cli_test.py - 12 tests
• tests/aignostics/dataset/service_test.py - 4 tests
• tests/aignostics/dataset/gui_test.py - 4 tests

All tests properly marked with required markers (@pytest.mark.unit, @pytest.mark.integration, @pytest.mark.e2e) ✅

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CI/CD Status

Check	Status
Lint	✅ SUCCESS
CodeQL	✅ SUCCESS
SonarQube	✅ PASSED (0 issues, 0.0% coverage on new code)
Tests	⏳ IN_PROGRESS (3 running, 2 queued)
Audit	⏳ QUEUED

Note: Tests are still running but expected to pass based on:

• No code changes (only dependency version bump)
• Stable API interface
• No breaking changes in release notes
• Lint and static analysis already passed

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Code Quality Checks

✅ No Critical Issues Found

Conventional Commits: ✅ PASS

764493f chore(deps): bump idc-index-data from 22.1.5 to 23.0.1

• Type: chore ✅
• Scope: deps ✅
• Format: Correct ✅

Test Markers: ✅ PASS (all 20 tests properly marked)

Type Checking: ✅ PASS (no changes to code, only dependency version)

Architecture Compliance: ✅ PASS (no code changes)

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Recommendations

✅ Approve and Merge

Rationale:

1. Data-only update - No API surface changes
2. Backward compatible - Stable interface contracts maintained
3. Clean release notes - No breaking changes mentioned
4. Proper testing - 20 tests covering dataset module
5. CI passing - Lint and static analysis green

📊 Post-Merge Monitoring

While risk is low, monitor these areas after deployment:

1. Dataset Downloads:

   • Verify IDC v23 collections download successfully
   • Check for any path/filename changes in new data release
   • Monitor aignostics dataset idc download command

2. Integration Tests:

   • E2E tests with @pytest.mark.e2e covering IDC operations
   • Scheduled tests running against staging environment

3. Error Logs:

   • Watch for Parquet schema mismatches
   • Monitor IDCClient initialization errors
   • Track s5cmd subprocess failures

Test Commands:

# After merge, verify dataset operations:
uv run aignostics dataset idc collections
uv run pytest -m "e2e and dataset" -v

# Check version detection:
python3 -c "from aignostics.third_party.idc_index import IDCClient; c=IDCClient.client(); print(f'IDC Version: {c.idc_version}')"
# Expected output: "IDC Version: v23"

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Medical Device Compliance

✅ No Regulatory Impact

• No code changes - Only dependency data update
• No algorithm changes - Data catalog update, not AI/ML model
• No HIPAA concerns - Public dataset metadata only
• No FDA submission required - Infrastructure dependency update

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Final Verdict

✅ APPROVE - Low-Risk Data Update

This is a routine dependency update for the IDC v23 data release. The package is essentially a data bundle (Parquet index files) with stable API surface. No breaking changes detected.

Action Items:

• ✅ Merge after CI completes
• 📊 Monitor dataset download operations post-deployment
• 🧪 Run E2E dataset tests in staging environment

Questions/Concerns: None identified. This is a standard data release update following semantic versioning where major version tracks IDC data release version.

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| Branch: dependabot/pip/idc-index-data-23.0.1

[codecov]

Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ All tests successful. No failed tests found.
see 22 files with indirect coverage changes

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Quality Gate passed

Issues
0 New issues
0 Accepted issues

Measures
0 Security Hotspots
0.0% Coverage on New Code
0.0% Duplication on New Code

See analysis details on SonarQube Cloud