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Pmd blockwise rank storage (#178)#197

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u-ferah wants to merge 2 commits into
apasarkar:mainfrom
u-ferah:pmd_rank_storage
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Pmd blockwise rank storage (#178)#197
u-ferah wants to merge 2 commits into
apasarkar:mainfrom
u-ferah:pmd_rank_storage

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@u-ferah

@u-ferah u-ferah commented Mar 18, 2026

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  • Added optional property to store the per block rank count to PMDArray as PMDArray.block_ranks stored as a torch tensor. (Solves Storing blockwise PMD rank #178)

  • Implemented counting and storing of block ranks to pmd_decomposition function.

  • Added option to run bandpass filters on factorized movies (in V) or vectorized movie arrays similar to the high pass filter

  • Added variable to control spike detection minimum distance window (was previously hard set to 10)

@apasarkar apasarkar self-assigned this Mar 21, 2026
@apasarkar apasarkar self-requested a review March 21, 2026 19:50
* Added optional property to store the per block rank count to PMDArray as PMDArray.block_ranks stored as a torch tensor. (Solves apasarkar#178)

* Implemented counting and storing of block ranks to pmd_decomposition function.

* Added variable to control spike detection minimum distance window (was previously hard set to 10)
@u-ferah

u-ferah commented Mar 25, 2026

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Removed filtering code (for further discussion in a separate issue).

Also, fixed a bug where the block rank was not stored when the block's rank was 0.

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