Update the runfiles library behavior to support an empty RUNFILES_MANIFEST_FILE #3655
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Instead fallback on a directory based approach.
This matches the behavior of rules_python: https://github.com/bazel-contrib/rules_python/blob/79f654686646e2ab213741bc4774ea9d69895b54/python/runfiles/runfiles.py#L458
This addresses #3654.