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black formatting
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dustinbleile committed Jul 26, 2024
1 parent aae535e commit cb59d0b
Showing 1 changed file with 32 additions and 31 deletions.
63 changes: 32 additions & 31 deletions tests/test_ipr/test_annotate.py
Original file line number Diff line number Diff line change
Expand Up @@ -41,37 +41,38 @@
),
}

KBDEV1231_TP53_ERR_MATCH_WT = {'altSeq': '',
'chromosome': 'chr17',
'comments': '',
'endPosition': '',
'gene': 'TP53',
'germline': False,
'hgvsCds': 'ENST00000269305:c.853G>A',
'hgvsGenomic': 'chr17:g.7673767C>T',
'hgvsProtein': 'TP53:p.E285K',
'key': 'c23a7b0387335e7a5ed6c1081a1822ae',
'library': 'F145233;F145265',
'ncbiBuild': 'GRCh38',
'normalAltCount': '',
'normalDepth': '',
'normalRefCount': '',
'proteinChange': 'p.E285K',
'refSeq': '',
'rnaAltCount': 311,
'rnaDepth': 370,
'rnaRefCount': 59,
'startPosition': '',
'transcript': 'ENST00000269305',
'tumourAltCopies': '',
'tumourAltCount': 64,
'tumourDepth': 100,
'tumourRefCopies': '',
'tumourRefCount': 36,
'variant': 'TP53:p.E285K',
'variantType': 'mut',
'zygosity': ''}

KBDEV1231_TP53_ERR_MATCH_WT = {
"altSeq": "",
"chromosome": "chr17",
"comments": "",
"endPosition": "",
"gene": "TP53",
"germline": False,
"hgvsCds": "ENST00000269305:c.853G>A",
"hgvsGenomic": "chr17:g.7673767C>T",
"hgvsProtein": "TP53:p.E285K",
"key": "c23a7b0387335e7a5ed6c1081a1822ae",
"library": "F145233;F145265",
"ncbiBuild": "GRCh38",
"normalAltCount": "",
"normalDepth": "",
"normalRefCount": "",
"proteinChange": "p.E285K",
"refSeq": "",
"rnaAltCount": 311,
"rnaDepth": 370,
"rnaRefCount": 59,
"startPosition": "",
"transcript": "ENST00000269305",
"tumourAltCopies": "",
"tumourAltCount": 64,
"tumourDepth": 100,
"tumourRefCopies": "",
"tumourRefCount": 36,
"variant": "TP53:p.E285K",
"variantType": "mut",
"zygosity": "",
}


@pytest.fixture(scope="module")
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