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  1. indra Public

    Forked from sorgerlab/indra

    Integrated Network and Dynamical Reasoning Assembler

    Python 1

  2. bioagents Public

    Forked from sorgerlab/bioagents

    Biological reasoning agents

    Python

  3. emmaa Public

    Forked from gyorilab/emmaa

    Ecosystem of Machine-maintained Models with Automated Analysis

    Python

  4. famplex Public

    Forked from sorgerlab/famplex

    Namespace encoding hierarchical relationships between proteins, protein families, and protein complexes.

    Python

  5. opencomet Public

    OpenComet comet assay image analysis

    Java 2

  6. gyorilab/gilda Public

    Grounding of biomedical named entities with contextual disambiguation

    Python 43 13

1,141 contributions in the last year

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Activity overview

Contributed to gyorilab/mira, biopragmatics/bioregistry, sorgerlab/indra and 43 other repositories
Loading A graph representing bgyori's contributions from March 24, 2024 to March 25, 2025. The contributions are 76% commits, 11% pull requests, 9% code review, 4% issues.

Contribution activity

March 2025

Created a pull request in biopragmatics/bioregistry that received 6 comments

Replace mismatch file with more general mappings table

Background: After #1439 and #1456 it makes sense to systematically review certain mappings and record incorrect ones (currenty in mismatch.json) so…

+325 −274 lines changed 6 comments
Opened 8 other pull requests in 4 repositories
Reviewed 4 pull requests in 3 repositories
Opened 3 issues in 3 repositories
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