XNAT MRS Uploader

Local Flask web app for bulk uploading Siemens MRS spectroscopy files (.rda and .dat) into XNAT scan resources.

This app is intended to be run locally (default bind: 127.0.0.1) and accessed in a web browser.

Repo: https://github.com/brown-bnc/XNAT-uploader-webapp

---

Install (Python venv)

These instructions install from a tagged release, which is recommended for reproducible installs.

macOS / Linux

python3 -m venv xnat_uploader_venv
source xnat_uploader_venv/bin/activate
python -m pip install --upgrade pip

pip install https://github.com/brown-bnc/XNAT-uploader-webapp/archive/refs/tags/v0.1.5.zip

xnat-mrs-uploader

Windows (PowerShell)

py -m venv xnat_uploader_venv
.\xnat_uploader_venv\Scripts\Activate.ps1
python -m pip install --upgrade pip

pip install https://github.com/brown-bnc/XNAT-uploader-webapp/archive/refs/tags/v0.1.5.zip

xnat-mrs-uploader

---

This project was supported by grant # NIGMS 5P30GM149405