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50 changes: 48 additions & 2 deletions xnat_admin_tools/test_xnat_api.py
Original file line number Diff line number Diff line change
Expand Up @@ -4,6 +4,7 @@
import random
import shutil
import sys
import time

import requests
from dotenv import load_dotenv
Expand All @@ -19,8 +20,12 @@
# Only Export Scans < 100MB
MAX_TEST_EXPORT_SIZE = 100000000

if BASE_URL == "https://qa-xnat.bnc.brown.edu":
session_ids = "XNAT_DEV_E00017"
else:
session_ids = "XNAT_E00114"


# Helper function for making requests
def make_request(method, endpoint, data=None, params=None):
url = f"{BASE_URL}{endpoint}"
try:
Expand Down Expand Up @@ -54,6 +59,36 @@ def extract_valid_sequence(session_report):
return rand_scan["data_fields"]["ID"]


def run_export_for_session(sess_id):
print(f"Starting export for session {sess_id}...")
out_dir = f"./tests/xnat2bids_{sess_id}"

if os.path.exists(out_dir):
shutil.rmtree(out_dir, ignore_errors=True)
os.makedirs(out_dir, exist_ok=True)

try:
dicom_export(
session=sess_id,
bids_root_dir=out_dir,
user=USERNAME,
password=PASSWORD,
host=BASE_URL,
session_suffix="-1",
bidsmap_file="",
includeseq=[],
skipseq=[],
log_id=f"pytest-{sess_id}",
verbose=0,
overwrite=True,
validate_frames=False,
correct_dicoms_config="",
)
print(f"Export for session {sess_id} completed.")
except Exception as e:
print(f"Export for session {sess_id} failed: {e}")


# Test Suite
def test_xnat_api():
print("Starting XNAT API tests...")
Expand Down Expand Up @@ -184,7 +219,18 @@ def test_xnat_api():
assert len(dicom_files) > 0, "DICOM export failed: No files found"
print(f"DICOM export successful. Files exported: {len(dicom_files)}")

# Concurrent export speed test
start_time = time.time()
TIMEOUT = 1200

run_export_for_session(session_id)

end_time = time.time()
duration = end_time - start_time

assert duration < TIMEOUT
print(f"Concurrent exports completed in {duration:.2f} seconds.")


# Run the tests
def main():
test_xnat_api()