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  1. V-pipe V-pipe Public

    Forked from cbg-ethz/V-pipe

    V-pipe is a pipeline designed for analysing NGS data of short viral genomes

    Jupyter Notebook

  2. viralrecon viralrecon Public

    Forked from nf-core/viralrecon

    Assembly and intrahost/low-frequency variant calling for viral samples

    Nextflow

  3. BLASTmap BLASTmap Public

    Forked from kb-bioinf/BLASTmap

    Visualisation of BLAST data as interactive heat maps

    R

  4. floria_analysis_workflow floria_analysis_workflow Public

    Forked from jsgounot/floria_analysis_workflow

    Worflows linked with Glopp

    Python

  5. SARS-CoV-2-wastewater-sample-processing-VILOCA SARS-CoV-2-wastewater-sample-processing-VILOCA Public

    Forked from cbg-ethz/SARS-CoV-2-wastewater-sample-processing-VILOCA

    wastewater-sample-processing-VILOCA

    Jupyter Notebook

  6. VirSieve VirSieve Public

    Forked from Zymo-Research/VirSieve

    Run manager for the VirSieve Pipeline by Zymo Research

    Python