v1.2.0

Used starting with processing of MTS020 and CPS006 data (July 2022)

Changes:

• Text changes to report
• Fixes to plot axes and display errors
• Improvements to combination plots
• Addition of screen_qc module

What's Changed

Full Changelog: v1.1.0...v1.2.0

v1.1.0

Used starting with re-process of MTS018 and CPS03 data (March 2022)

Changes

• Dose rounding to 4 significant figures (with maximum precision of 6 decimal places)
• Reading in of csv files using pd.read_csv() function now includes the dtype={'pert_dose':'str'} argument
• Reading in of csv files with data.table::fread() in the normalization module now uses colClasses = "character"
• Dose response curve fitting changes:
  • Requires that the upper asymptote of the curve be between 0.99 and 1.01
  • Requires that the lower asymptote of the curve be between 0 and 1.01
  • No longer enforces decreasing curves (curves at most slightly increasing due to previous 2 specifications)
  • Initializes the curve fitting algorithm to guess an upper asymptote of 1 and a lower asymptote of 0.5

v1.0.0

Initial release of the MTS pipeline. Used for MTS018 and CPS003/004