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Welcome to deepTools GitHub repository! Please check the following regarding
your pull request :

  • Does the PR contain new feature?
  • Does the PR contain bugfix?
  • Does the PR contain documentation changes?
  • Does the PR contain changes to the galaxy wrapper?

In this PR I am introducing diagram first documentaiton. You can see how it renders here:
https://github.com/CodeBoarding/GeneratedOnBoardings/blob/main/deeptools/on_boarding.md

The diagrams highlight the main abstract components and their interactions, enabling researchers to quickly understand the project's flow. Since many scientists focus on specific parts of the codebase—typically the methods rather than the infrastructure- these diagrams help them locate and edit relevant components within the full pipeline context.

Any feedback is more than welcome! We have introduced a github action which will keep the docs automatically up-to-date with new changes, I'd love to integrate that for you if you are interested.

Would love to connect and discuss how we can help!

Full disclosure: we're trying to turn this into a startup, but we're still in a very early stage and figuring out what will actually be useful for people.

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