Paper available at PeerJ: A laid-back trip through the Hennigian Forests
Concept by Evgeny Mavrodiev
Scripts by github.com/dellch
FORESTER version 1.0
Trees.rb represents a conventional binary matrix as an array of the Newick trees
Seedlings.rb represents a 3TS matrix as an array of the Newick trees
ruby (developed with ruby 2.3)
github | download | old version
ruby trees.rb PATH_TO_MATRIX_FILE
trees.rb outputs three files:
- NO_POLY_original-filename.txt
- WITH_POLY_original-filename.txt
- ADDITIONAL_FILE_original-filename.txt
ruby seedlings.rb PATH_TO_MATRIX_FILE
seedlings.rb outputs one file:
- altered_original-filename.txt