PolyCG

Module to coarse-grain elastic parameters of DNA models

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Download

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Requires recursive cloning of submodules

git clone --recurse-submodules -j4 [email protected]:eskoruppa/PolyCG.git

Documentation coming soon

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Basic Functionality

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Coarse-Grain

import polycg


cg_gs, cg_stiff = polycg.coarse_grain(
    gs,
    stiff,
    composite_size,
    start_id=start_id,
    end_id=end_id,
    allow_partial=allow_partial,
    block_ncomp=block_ncomp,
    overlap_ncomp=overlap_ncomp,
    tail_ncomp=tail_ncomp
)