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Add verbose logging and extend StanfordQDessBoneUNet2DSTAPLE initiali…

gattiapushed 2 commits to bone_seg • d7fbf95…b9751c4 • 
2 hours ago

Enhance STAPLE-based bone segmentation with configurable parameters a…

gattiapushed 1 commit to bone_seg • 53e4d4b…d7fbf95 • 
14 days ago

Implement STAPLE-based multi-plane bone segmentation with improved ma…

gattiapushed 1 commit to bone_seg • 3663691…53e4d4b • 
15 days ago

Add framework for STAPLE-based multi-plane segmentation

gattiapushed 1 commit to bone_seg • 22053a4…3663691 • 
15 days ago

Refactor bone segmentation volume processing

gattiapushed 1 commit to bone_seg • b24875e…22053a4 • 
15 days ago

Add plane-specific bone segmentation models for Stanford QDESS

gattiapushed 2 commits to bone_seg • 2f2b960…b24875e • 
16 days ago

Merge branch 'bone_seg' of https://github.com/gattia/DOSMA into bone_seg

gattiapushed 2 commits to bone_seg • c222823…2f2b960 • 
on Oct 3, 2024

Updating DESS T2 to not require Tg & GlArea.

gattiapushed 1 commit to bone_seg • 7596c2d…c222823 • 
on Oct 3, 2024

Update new sitk tests to use dicom data - thus not to run if data not…

gattiapushed 1 commit to bone_seg • ac65e62…7596c2d • 
on Aug 19, 2024

Linting

gattiapushed 1 commit to bone_seg • 2063e0c…ac65e62 • 
on Aug 19, 2024

Update MedicalVolume.to_sitk

gattiapushed 1 commit to bone_seg • 97bbb31…2063e0c • 
on Aug 19, 2024

No codecov for forked repositroy pull request updates

gattiapushed 1 commit to bone_seg • 4b5f3a8…97bbb31 • 
on Aug 19, 2024

linting

gattiapushed 1 commit to bone_seg • c15a8a4…4b5f3a8 • 
on Aug 19, 2024

Update docs to specify we are not python 3.7+

gattiapushed 2 commits to bone_seg • 055f282…c15a8a4 • 
on Aug 19, 2024

update np.complex to use builtin complex

gattiapushed 1 commit to bone_seg • 2cec41f…055f282 • 
on Aug 18, 2024

Remove pinned numba & simpleitk from CI

gattiapushed 1 commit to bone_seg • 34f1e1e…2cec41f • 
on Aug 17, 2024

Drop CI Documentation for 3.7

gattiapushed 1 commit to bone_seg • d3f5279…34f1e1e • 
on Aug 17, 2024

Drop CI testing for python 3.6 and add 3.9/3.10

gattiapushed 1 commit to bone_seg • f2b505a…d3f5279 • 
on Aug 17, 2024

Drop CI testing for python 3.6 and add 3.9/3.10

gattiapushed 1 commit to bone_seg • ae5fcd8…f2b505a • 
on Aug 17, 2024

Fixing sni import errors.

gattiapushed 3 commits to bone_seg • f2f6907…ae5fcd8 • 
on Aug 17, 2024

Update gitignore to not log nipype logs.

gattiapushed 13 commits to bone_seg • 310b399…f2f6907 • 
on Aug 17, 2024

update make dev to install pytest

gattiapushed 7 commits to bone_seg • cce80f8…310b399 • 
on Aug 16, 2024

Add cube model

gattiapushed 2 commits to bone_seg • 565cd3e…cce80f8 • 
on Apr 24, 2024

Merge branch 'bone_seg' of https://github.com/gattia/DOSMA into bone_seg

gattiapushed 2 commits to bone_seg • 1c13dd1…565cd3e • 
on Apr 12, 2024

Update mapss logic to handle masks

gattiapushed 1 commit to mapss_masks • bd5efec…6d366b7 • 
on Oct 27, 2023

bumpversion: v0.1.1 -> v0.1.2 (ad12#130)

gattiacreated mapss_masks • bd5efec • 
on Oct 27, 2023

stanford_qdess_bone to return uint8 masks

gattiapushed 1 commit to bone_seg • 4db4709…1c13dd1 • 
on Oct 17, 2023

Add bone segs figures

gattiapushed 2 commits to bone_seg • ee10a10…4db4709 • 
on Aug 29, 2023