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[Bug]: URP Aggregation does not account for Target-Decoy Labels

bugSomething isn't workingSomething isn't working

Status: Open.

Bug

#208 In hgb-bin-proteomics/pyXLMS;

· michabirklbauer opened on Apr 15, 2026

[Maintenance]: Upgrade GitHub Actions workflows, ty migration

maintenanceActions for maintaining product healthActions for maintaining product health

Status: Open.

Task

#207 In hgb-bin-proteomics/pyXLMS;

· michabirklbauer opened on Apr 1, 2026

[Bug]: Potential incorrect modification parse in MS Annika and XlinkX

bugSomething isn't workingSomething isn't working

Status: Open.

Bug

#204 In hgb-bin-proteomics/pyXLMS;

· michabirklbauer opened on Mar 19, 2026

[Feature Request]: Re-label decoys

enhancementNew feature or requestNew feature or request

feature requestRequest for a new featureRequest for a new feature

Status: Open.

Feature

#203 In hgb-bin-proteomics/pyXLMS;

· michabirklbauer opened on Mar 2, 2026

[Documentation Request]: Add limitations to README and pyXLMS-docs

documentationImprovements or additions to documentationImprovements or additions to documentation

Status: Open.

Task

#202 In hgb-bin-proteomics/pyXLMS;

· michabirklbauer opened on Feb 25, 2026

[Feature Request]: xiNET and xiVIEW parser

enhancementNew feature or requestNew feature or request

feature requestRequest for a new featureRequest for a new feature

Status: Open.

Feature

#201 In hgb-bin-proteomics/pyXLMS;

· jkosinski opened on Feb 24, 2026