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Merged
merged 20 commits into from
May 15, 2025
Merged

Update installer #116

merged 20 commits into from
May 15, 2025

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gesinecauer
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Update installer for compatibility with python >= 3.12 / setuptools >= 60

Note that setup.py's command-line interface is deprecated. Also, pyproject.toml will soon be required for an editable install.

gesinecauer and others added 20 commits January 21, 2020 11:34
@gesinecauer
Merge pull request #8 from hiclib/master
7af1330 
Since hiclib:master was updated via my modifying_pastis_poisson branch
@gesinecauer
Merge pull request #10 from hiclib/master
5590bb4 
Adding unit tests for diploid (hiclib#66)
@gesinecauer
Merge pull request #12 from hiclib/master
72489a4 
MAINT deprecated fastio (hiclib#67)
@gesinecauer
Merge pull request #15 from hiclib/master
c637358 
Update gesinecauer/pastis with hiclib/pastis
@gesinecauer
Merge pull request #16 from hiclib/master
9aeb2cc 
Updates from hiclib/pastis, mostly Mozes's contributions
@gesinecauer
removed externals dir
c345cca
@gesinecauer
for removal of externals (iced submodule)
35d3fd2
@gesinecauer
setuptools doesnt support nested setup.py
89f7bfc
@gesinecauer
Revert "setuptools doesnt support nested setup.py"
32d01fa 
This reverts commit 89f7bfc.
@gesinecauer
setuptools doesnt support nested setup.py
57647b9
@gesinecauer
FIX install for python >=3.12
c0127d7
@gesinecauer
C/cython no longer needed
b8b3279
@gesinecauer
Merge pull request #17 from gesinecauer/remove_iced_submodule
68f83d0 
Remove iced submodule
@gesinecauer
removing unused files
951e5c9
@gesinecauer
ignore *.egg-info
b3fad82
@gesinecauer
testing on newer python versions
0b3f09a
@gesinecauer
'setup.py install' is deprecated
138f035
@gesinecauer
update url
10ef62f
@gesinecauer
add entrypoints for 2014 and 2019 paper code
1613db7
@gesinecauer
update for compatibility with PEP517
cfc8c8e
@gesinecauer
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Please merge the following pull request prior to this one: #113

Note that this pull request includes code from #114, so if you merge this one, you won't need to merge #114 anymore.

@gesinecauer gesinecauer merged commit e752f70 into hiclib:master May 15, 2025
@gesinecauer gesinecauer deleted the update_installer branch May 15, 2025 00:35
@gesinecauer gesinecauer mentioned this pull request May 15, 2025
Closed
@gesinecauer gesinecauer restored the update_installer branch May 17, 2025 00:14
@gesinecauer gesinecauer deleted the update_installer branch May 17, 2025 00:15
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