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replace openblas with atlas for cblas, update aws-tutorial system.py #36

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Merged
slabasan merged 1 commit into from
Sep 29, 2025
Merged

replace openblas with atlas for cblas, update aws-tutorial system.py #36

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2 changes: 1 addition & 1 deletion latest/docker/Dockerfile.benchpark
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Original file line number Diff line number Diff line change
Expand Up @@ -22,7 +22,7 @@ RUN apt-get update && \
xz-utils \
zstd \
bzip2 \
libopenblas-dev \
libatlas-base-dev \
&& rm -rf /var/lib/apt/lists/*

SHELL [ "/bin/bash", "-c" ]
Expand Down
124 changes: 42 additions & 82 deletions latest/tutorial-code/system-description/aws-tutorial/system.py
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Original file line number Diff line number Diff line change
Expand Up @@ -3,13 +3,10 @@
#
# SPDX-License-Identifier: Apache-2.0

import json
import subprocess

from benchpark.directives import maintainers, variant
from benchpark.openmpsystem import OpenMPCPUOnlySystem
from benchpark.paths import hardware_descriptions
from benchpark.system import System
from benchpark.system import System, compiler_def, compiler_section_for


class AwsTutorial(System):
Expand All @@ -20,67 +17,56 @@ class AwsTutorial(System):

id_to_resources = {
"c7i.48xlarge": {
"system_site": "aws",
"hardware_key": str(hardware_descriptions)
+ "/AWS_Tutorial-zen-EFA/hardware_description.yaml",
"sys_cores_per_node": 192,
"sys_mem_per_node_GB": 384,
},
"c7i.metal-48xl": {
"system_site": "aws",
"hardware_key": str(hardware_descriptions)
+ "/AWS_Tutorial-zen-EFA/hardware_description.yaml",
"sys_cores_per_node": 192,
"sys_mem_per_node_GB": 384,
},
"c7i.24xlarge": {
"system_site": "aws",
"hardware_key": str(hardware_descriptions)
+ "/AWS_Tutorial-zen-EFA/hardware_description.yaml",
"sys_cores_per_node": 96,
"sys_mem_per_node_GB": 192,
},
"c7i.metal-24xl": {
"system_site": "aws",
"hardware_key": str(hardware_descriptions)
+ "/AWS_Tutorial-zen-EFA/hardware_description.yaml",
"sys_cores_per_node": 96,
"sys_mem_per_node_GB": 192,
},
"c7i.12xlarge": {
"system_site": "aws",
"hardware_key": str(hardware_descriptions)
+ "/AWS_Tutorial-zen-EFA/hardware_description.yaml",
"sys_cores_per_node": 48,
"sys_mem_per_node_GB": 96,
},
}

variant(
"instance_type",
values=("c7i.48xlarge", "c7i.metal-48xl", "c7i.24xlarge", "c7i.metal-24xl", "c7i.12xlarge"),
values=(
"c7i.48xlarge",
"c7i.metal-48xl",
"c7i.24xlarge",
"c7i.metal-24xl",
"c7i.12xlarge",
),
default="c7i.24xlarge",
description="AWS instance type",
)

def __init__(self, spec):
super().__init__(spec)
self.programming_models = [OpenMPCPUOnlySystem()]

# Common attributes across instances
self.programming_models = [OpenMPCPUOnlySystem()]
self.system_site = "aws"
self.scheduler = "flux"
# TODO: for some reason I have to index to get value, even if multi=False
self.hardware_key = (
str(hardware_descriptions)
+ "/AWS_Tutorial-sapphirerapids-EFA/hardware_description.yaml"
)

attrs = self.id_to_resources.get(self.spec.variants["instance_type"][0])
for k, v in attrs.items():
setattr(self, k, v)

json_resource_spec = subprocess.check_output("flux resource R", shell=True)
resource_dict = json.loads(json_resource_spec)
self.sys_cores_per_node = resource_dict["execution"]["R_lite"][0]["children"][
"core"
]
self.sys_cores_per_node = [int(c) for c in self.sys_cores_per_node.split("-")]
self.sys_cores_per_node[-1] += 1
self.sys_cores_per_node = len(list(range(*self.sys_cores_per_node)))
self.sys_nodes = resource_dict["execution"]["R_lite"][0]["rank"]
self.sys_nodes = [int(n) for n in self.sys_nodes.split("-")]
self.sys_nodes[-1] += 1
self.sys_nodes = len(list(range(*self.sys_nodes)))

# def system_specific_variables(self):
# return {
# "extra_cmd_opts": '--mpi=pmix --export=ALL,FI_EFA_USE_DEVICE_RDMA=1,FI_PROVIDER="efa",OMPI_MCA_mtl_base_verbose=100',
# }

def compute_packages_section(self):
return {
"packages": {
Expand All @@ -89,9 +75,10 @@ def compute_packages_section(self):
"buildable": False,
},
"gmake": {"externals": [{"spec": "[email protected]", "prefix": "/usr"}]},
"lapack": {
"externals": [{"spec": "[email protected]", "prefix": "/usr"}],
"buildable": False,
"blas": {"buildable": False},
"lapack": {"buildable": False},
"atlas": {
"externals": [{"spec": "[email protected]", "prefix": "/usr"}],
},
"mpi": {"buildable": False},
"openmpi": {
Expand All @@ -103,7 +90,7 @@ def compute_packages_section(self):
]
},
"cmake": {
"externals": [{"spec": "cmake@4.0.2", "prefix": "/usr"}],
"externals": [{"spec": "cmake@4.1.1", "prefix": "/usr"}],
"buildable": False,
},
"git": {
Expand Down Expand Up @@ -164,7 +151,7 @@ def compute_packages_section(self):
"caliper": {
"externals": [
{
"spec": "caliper@master%[email protected]+adiak+mpi",
"spec": "caliper@master+adiak+mpi%[email protected]",
"prefix": "/usr",
}
],
Expand Down Expand Up @@ -212,49 +199,22 @@ def compute_packages_section(self):
}

def compute_compilers_section(self):
return {
"compilers": [
{
"compiler": {
"spec": "[email protected]",
"paths": {
"cc": "/usr/bin/gcc",
"cxx": "/usr/bin/g++",
"f77": "/usr/bin/gfortran-11",
"fc": "/usr/bin/gfortran-11",
},
"flags": {},
"operating_system": "ubuntu22.04",
"target": "x86_64",
"modules": [],
"environment": {},
"extra_rpaths": [],
}
}
]
}
return compiler_section_for(
"gcc",
[
compiler_def(
"[email protected] languages=c,c++,fortran",
"/usr/",
{"c": "gcc", "cxx": "g++", "fortran": "gfortran-11"},
)
],
)

def compute_software_section(self):
return {
"software": {
"packages": {
"default-compiler": {"pkg_spec": "[email protected]"},
"default-mpi": {"pkg_spec": "[email protected]%[email protected]"},
"compiler-gcc": {"pkg_spec": "[email protected]"},
"lapack": {"pkg_spec": "[email protected]"},
"mpi-gcc": {"pkg_spec": "[email protected]%[email protected]"},
}
}
}

def compute_spack_config_section(self):
return {
"config": {},
"concretizer": {},
"modules": {},
"packages": {},
"repos": [],
"compilers": [],
"mirrors": {},
"providers": {"mpi": ["openmpi"]},
}