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Always use local htslib#47

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fgvieira wants to merge 7 commits into
metaDMG-dev:masterfrom
fgvieira:makefile_cleanup
Closed

Always use local htslib#47
fgvieira wants to merge 7 commits into
metaDMG-dev:masterfrom
fgvieira:makefile_cleanup

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fgvieira requested a review from ANGSD March 26, 2026 08:52
@ANGSD

ANGSD commented Mar 31, 2026

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Currently the program supports, 3 ways to use htslib. 1) systemwide 2) local version compiled 3) clone and compile form internet. Does this pull request remove some of these ?

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@ANGSD

ANGSD commented Mar 31, 2026

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Currently the program supports, 3 ways to use htslib. 1) systemwide 2) local version compiled 3) clone and compile form internet. Does this pull request remove some of these ?

@ANGSD

ANGSD commented Apr 18, 2026

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We want to retain the the possibility of the three different ways to include htslib. Makefile has been updated so it only links against the htslibsource dependencies when using htslib as source. I am closing the pull request. Best regards

@ANGSD ANGSD closed this Apr 18, 2026
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