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36fb52c
deslabs copy from public
mgckind Feb 13, 2018
db608ad
Merge branch 'deslabs' into login
mgckind Feb 13, 2018
52e42b5
update Readme
mgckind Feb 13, 2018
80b8709
delete some login files
mgckind Feb 13, 2018
a5e7fb2
delete some login files
mgckind Feb 13, 2018
6686721
updates to login page and style
mgckind Feb 13, 2018
5292c66
adding login_deslabs
mgckind Feb 13, 2018
3444545
update Settings
mgckind Feb 13, 2018
496729e
update login and main scripts
mgckind Feb 13, 2018
8053c62
Merge pull request #85 from mgckind/login
mgckind Feb 13, 2018
e3d7e36
update login_deslabs
mgckind Feb 13, 2018
d75d24a
add db name to Welcome message
mgckind Feb 13, 2018
e225ead
add desoper to update info
mgckind Feb 13, 2018
6f51f81
generalize update_info to include other db
mgckind Feb 13, 2018
dae52d0
add db to change password form
mgckind Feb 13, 2018
63efeec
Merge pull request #86 from mgckind/login
mgckind Feb 13, 2018
bcdd313
add reset password form after expiration
mgckind Feb 13, 2018
9aeec77
Merge pull request #87 from mgckind/login
mgckind Feb 13, 2018
44827fb
Change DR1 -> DES; Add Epoch interface; Finished the implemetation an…
Feb 16, 2018
5cc10b0
Change DR1 -> DES; Add Epoch interface; Finished the implemetation an…
Feb 20, 2018
2bd43b4
Merge branch 'deslabs' of https://github.com/mgckind/desaccess into tab
Feb 20, 2018
3ddc80b
ready to merge;
Feb 20, 2018
7d09c19
Merge pull request #88 from mgckind/tab
mgckind Feb 20, 2018
4494c97
add DB to Query box title
mgckind Feb 20, 2018
947ae46
fix typo
mgckind Feb 20, 2018
448f82e
add DB to Table Schema title
mgckind Feb 20, 2018
9b107e0
remove DR1 from footprint title
mgckind Feb 20, 2018
e997e35
download/uncpompress file and display on the frontend
Feb 22, 2018
ea77f77
download/uncpompress file and display on the frontend
Feb 22, 2018
11b0ec3
fix conflict
Mar 15, 2018
64707c0
Merge pull request #92 from mgckind/tab
mgckind Apr 3, 2018
8ca114f
Adding tabs to table schema
mgckind Apr 3, 2018
a8246ea
modifying api to work with internal DES
mgckind Apr 3, 2018
741605a
update elements
mgckind Apr 3, 2018
24a414d
update main pages and all/my tables
mgckind Apr 3, 2018
49beb2f
Merge pull request #94 from mgckind/mck
mgckind Apr 3, 2018
2b73b86
adding download
Apr 5, 2018
52d2b90
Merge pull request #95 from mgckind/download
mgckind Apr 6, 2018
df661e5
Updated deslabs.py for vistools.
lgelman2 Jun 15, 2018
79fa01a
Added dr1_chart.py and dr1_vistools.py.
lgelman2 Jun 15, 2018
7dfaf0e
Updated ea_tasks.py for vistools.
lgelman2 Jun 15, 2018
5e42077
Updated elements for vistools.
lgelman2 Jun 15, 2018
ddb33ac
Updated app.js for vistools.
lgelman2 Jun 15, 2018
58f040a
Updated/added help files for vistools.
lgelman2 Jun 15, 2018
e0aa053
Updated mainpages, side-toolbar, and home for vistools.
lgelman2 Jun 15, 2018
3d53d44
Added form page, positions overlay for data analysis for vistools.
lgelman2 Jun 15, 2018
99d6b57
Added form page, position overlay for finding chart for vistools.
lgelman2 Jun 15, 2018
b0fef3a
Updated results and thumb for vistools.
lgelman2 Jun 15, 2018
b68d80f
Added vistools plot functions.
lgelman2 Jun 15, 2018
454dc5a
Updated public for vistools.
lgelman2 Jun 15, 2018
661da8e
Added required plot data for vistools.
lgelman2 Jun 15, 2018
ce4a141
Added backup thumb pages for individual vistools thumbs.
lgelman2 Jun 15, 2018
6a7dd24
Removed some testing print statements from des-results.
lgelman2 Jun 15, 2018
d1d4b3e
Fixed conflicting user/pass b/w makeDESthumb and DB connection.
lgelman2 Jun 15, 2018
364a8b7
Fixed incorrect logfile statements.
lgelman2 Jun 18, 2018
aaaeaf7
Merge pull request #97 from mgckind/deslabs-vistools
mgckind Aug 8, 2018
a6bc045
fix Settings
mgckind Aug 9, 2018
b016c89
replae mysql config file
mgckind Sep 1, 2018
f6d1137
update config yaml file
mgckind Sep 1, 2018
f521dec
fixbug
mgckind Sep 2, 2018
d7df965
remove import
mgckind Sep 2, 2018
6773258
vulcanized
mgckind Oct 23, 2018
53c3202
Fixed finding-chart and vistools for deslabs branch
lgelman2 Oct 31, 2018
9c396ef
updated DecConverter for increased precision like in bulkthumbs
lgelman2 Nov 7, 2018
dd4973f
Switched the makedesthumbs call to bulkthumbs. Adjusted file naming t…
lgelman2 Nov 7, 2018
1f73d1d
bulkthumbs_12 for use by finding chart
lgelman2 Nov 7, 2018
4e71a70
Added bulktasks method for handling bulkthumbs. Fixed directory probl…
lgelman2 Nov 15, 2018
d1f3660
Bulkthumbs_12 - minor changes, like to directories and argparser, spe…
lgelman2 Nov 15, 2018
0d8af31
Added handlers for bulkthumbs
lgelman2 Nov 15, 2018
d9cba26
Jobid now generates with underscores instead of hypens.
lgelman2 Nov 15, 2018
52e48d4
Jobid now generates with underscores instead of hypens.
lgelman2 Nov 15, 2018
3932434
Added code for bulkthumbs.
lgelman2 Nov 15, 2018
5bd171b
fixed a typo
lgelman2 Nov 15, 2018
782e5d1
Added intermediary script for bulkthumbs.
lgelman2 Nov 15, 2018
33417bf
Added bulkthumbs webpages
lgelman2 Nov 15, 2018
f806250
New homepage photos for data-analysis, finding-chart, and bulkthumbs.
lgelman2 Nov 15, 2018
4a7ac69
Merge pull request #102 from mgckind/deslabs-findingvistools
mgckind Nov 15, 2018
0b757ea
make sure srop uses int values
mgckind Nov 16, 2018
ad85b83
remove exrta console logs
mgckind Nov 16, 2018
ceaec78
remove example queries from api.py and add them to separate file
mgckind Nov 16, 2018
5b905c1
Merge pull request #103 from mgckind/query_examples
mgckind Nov 16, 2018
1a27746
remove old cutouts from visible page
mgckind Nov 16, 2018
68974bd
remove old cutouts from visible page
mgckind Nov 16, 2018
ae6778f
tab to spaces
mgckind Nov 16, 2018
6d3746b
vulcanized
mgckind Nov 16, 2018
f520978
vulcanized
mgckind Nov 16, 2018
579b2af
Merge pull request #104 from mgckind/cutouts
mgckind Nov 16, 2018
c3a27d1
removed extraneous whitespace from development
lgelman2 Nov 16, 2018
205f864
now errors before submitting job if no options are selected
lgelman2 Nov 16, 2018
627f1ce
added list of databases to check from in anticipation of including mo…
lgelman2 Nov 16, 2018
992f269
changed all tabs to spaces
lgelman2 Nov 16, 2018
9e7c2e3
now errors before submitting job if no options are selected
lgelman2 Nov 16, 2018
1c2cd71
changed all tabs to spaces
lgelman2 Nov 16, 2018
e3f1e93
moved cpu scaling from ea_tasks to bulk_cutout
lgelman2 Nov 16, 2018
21e3949
only tarballs all file if job_size is small (<=100 objects)
lgelman2 Nov 16, 2018
0d855cd
vulcanized version of these updates
lgelman2 Nov 16, 2018
8cc7feb
fix footprint page to work with Y3A1 data
mgckind Nov 16, 2018
008a740
Merge pull request #105 from mgckind/deslabs-minorupdates
mgckind Nov 16, 2018
5996ac2
add y1 and sv tiles files
mgckind Nov 17, 2018
b7a7900
Add extra button and checkboxes
mgckind Nov 17, 2018
5cd4010
vulcanized
mgckind Nov 17, 2018
1a114e4
Merge pull request #106 from mgckind/y1foot
mgckind Nov 17, 2018
16dbb00
added create and check tokens
mgckind Nov 17, 2018
c9e1668
added user to return
mgckind Nov 17, 2018
fb3d094
add token ttl, /token end point and token functions
mgckind Nov 19, 2018
4679256
fixing Apiquery
mgckind Nov 19, 2018
665292a
Added code for list.json for the my jobs display.
lgelman2 Nov 19, 2018
dcd2cbe
Changed job_type from cutoutb to coadd
lgelman2 Nov 19, 2018
2a783be
fixed thumbnail formatting for file name length
lgelman2 Nov 19, 2018
f65de4d
list.json now has all file formats listed
lgelman2 Nov 19, 2018
8a352ec
Fixed typo in list.json creation
lgelman2 Nov 19, 2018
a1a046c
chenged logfile name to log.log
lgelman2 Nov 20, 2018
daf2f26
changed lognames for make_chart and run_vistools to log.log
lgelman2 Nov 20, 2018
3ccd9ce
fixed thumbnail formatting for file name length again
lgelman2 Nov 20, 2018
292f868
Added path to plotdata for plotutils.py
lgelman2 Nov 20, 2018
1a9cac6
changed file paths to use the static path
lgelman2 Nov 20, 2018
76b14a3
vulcanized
lgelman2 Nov 20, 2018
1e89be5
Added list_all.json to bulk_tasks and removed non-png formats from li…
lgelman2 Nov 20, 2018
81c7f1b
fixed naming bug when making both a tiff and a png
lgelman2 Nov 20, 2018
8e808d5
made the creation of list.json and list_all.json more consistent acro…
lgelman2 Nov 20, 2018
2674f23
make_chart uses its own logfile now instead of bulkthumbs'.
lgelman2 Nov 20, 2018
d5f83f6
added list_all.txt for bulktasks and wget
lgelman2 Nov 21, 2018
541e6aa
Merge pull request #107 from mgckind/deslabs-cutoutsdisplay
mgckind Nov 26, 2018
05a107c
fix Tokens table, TokenAPI and query API
mgckind Nov 26, 2018
03c4e4c
fix JobAPI
mgckind Nov 26, 2018
724a53c
Merge pull request #108 from mgckind/apitoken
mgckind Nov 26, 2018
59ac2a3
Updated plots from matplotlib 2.1.1 to matplotlib 2.2.2.
lgelman2 Nov 26, 2018
5df77a8
add logger and initial working cutouts api
mgckind Nov 27, 2018
53cb68d
Merge pull request #109 from mgckind/api2
mgckind Nov 27, 2018
a4e5a27
Updated pickled plots from matplotlib 2.2.2 to matplotlib 3.0.1.
lgelman2 Nov 27, 2018
a9a42e5
Merge pull request #111 from mgckind/deslabs-fixvistools
mgckind Nov 28, 2018
08c7e65
Initial update to cutout api. Changed filter bands to single string i…
lgelman2 Nov 29, 2018
9aaf3f2
Changed filter bands to one string instead of five booleans.
lgelman2 Nov 29, 2018
e309e0f
added job_size and nprocs
lgelman2 Nov 29, 2018
54aeba2
added/fixed URLPATH
lgelman2 Nov 29, 2018
9033929
adding Jlabs
mgckind Nov 30, 2018
1dd0bc3
mysql file_list and size_list entries are now truncated to the expect…
lgelman2 Nov 30, 2018
fb4c3e8
Merge pull request #112 from mgckind/jlabnew
mgckind Nov 30, 2018
049798d
displays link to list_all.txt file and says there are too many files …
lgelman2 Nov 30, 2018
958565e
updated elements-built
lgelman2 Nov 30, 2018
f22baf9
use one single yaml file
mgckind Dec 1, 2018
004373b
add jlab files
mgckind Dec 1, 2018
d60dda5
add host and port from config file
mgckind Dec 1, 2018
ef14cc9
Merge pull request #113 from mgckind/fixes
mgckind Dec 1, 2018
93e32ec
Reverted to original des-results page.
lgelman2 Dec 2, 2018
15defe6
Reverted to original des-results.
lgelman2 Dec 2, 2018
49ac729
Merge pull request #114 from mgckind/deslabs-cutoutapi
mgckind Dec 2, 2018
1aad12d
Removed coadd and ra/dec from the required arguments; added checks to…
lgelman2 Dec 11, 2018
69a6c8b
Changed ApiCutoutHandler to be more synonymous with bulk_cutout.py
lgelman2 Dec 11, 2018
44c59e0
csvfile option now works
lgelman2 Dec 11, 2018
dd5794f
Fixed bug where specifying x/ysize for some but not all objects in a …
lgelman2 Dec 12, 2018
1ca4796
Continued fixing bug where specifying x/ysize for some but not all ob…
lgelman2 Dec 12, 2018
4566f19
Fixed display for weird aspect ratio or large tiles.
lgelman2 Dec 12, 2018
4e1f596
Added object-fit:cover to tile thumbnails to maintain aspect ratio wi…
lgelman2 Dec 12, 2018
34d6ed9
updated elements-built
lgelman2 Dec 12, 2018
8f62772
Changed df['COADDID'] to df['COADD_OBJECT_ID'] in run_vistools to be …
lgelman2 Dec 20, 2018
ecf01c9
Changed 'COADDID' to 'COADD_OBJECT_ID' to be more like bulk_cutout.
lgelman2 Dec 20, 2018
8f74e3f
Changed results columns buttons to say 'Images' instead of 'Cutouts.'
lgelman2 Dec 20, 2018
619fe41
Fixed bug in make_chart that added objects based on each tile, not ju…
lgelman2 Dec 20, 2018
0d4e008
fixed logging bug
lgelman2 Dec 20, 2018
0855e5a
Fixed bug in make_chart where helper objects were put into csv separa…
lgelman2 Dec 20, 2018
0827420
Simplified input_csv naming.
lgelman2 Dec 20, 2018
7e7e11a
If xs/ys were set to zero, then it would error. Now set to default va…
lgelman2 Dec 20, 2018
7604291
Fixed SingleTileDialog sizing. Organized document's indentation.
lgelman2 Dec 21, 2018
18b3150
Fixed keyerror in MakeRGB when x/ysize columns in input csvfile.
lgelman2 Dec 21, 2018
a59cecb
Only displays up to 300 images (size of small job). Download All butt…
lgelman2 Jan 3, 2019
6cfebe8
No options selected by default now. Shows error if job submitted with…
lgelman2 Jan 7, 2019
e05a998
removed extraneuous and confusing variable name in finding_chart
lgelman2 Jan 7, 2019
27a3557
removed duplicate code when creating list.json in make_chart
lgelman2 Jan 7, 2019
be6023e
packaged up the color bands into a list to pass it off to ea_tasks wi…
lgelman2 Jan 7, 2019
2cc1567
Matplotlib debug messages to stdout are now suppressed (switched to w…
lgelman2 Jan 8, 2019
d707079
Added some log comments to finding chart.
lgelman2 Jan 8, 2019
b731590
Added ApiChartHandler for finding chart.
lgelman2 Jan 8, 2019
c44311f
Fixed capitalization bug with MakeRGB that prevented it from using th…
lgelman2 Jan 8, 2019
a7f0bab
fixed typo
lgelman2 Jan 9, 2019
567f3ca
added new 'form not complete' popups to each job form.
lgelman2 Jan 9, 2019
84c4468
vulcanized
lgelman2 Jan 9, 2019
4589311
added /easyweb to the URLPATH
lgelman2 Jan 9, 2019
892d13e
fixed document indentation
lgelman2 Jan 28, 2019
3beae61
added link to list_all.txt to Files window in My Jobs and capped the …
lgelman2 Jan 28, 2019
ddb963f
added job size cap of 10,000 objects for cutouts
lgelman2 Jan 28, 2019
1bad32a
added target="_blank" to list_all.txt link
lgelman2 Jan 28, 2019
76e6aad
combined the two csv input buttons and two manual input buttons into …
lgelman2 Jan 29, 2019
729cf63
updated icons on cutouts options
lgelman2 Jan 30, 2019
3735668
updated elements-built
lgelman2 Jan 30, 2019
fd67d64
Merge pull request #115 from mgckind/deslabs-cutoutapi2
mgckind Mar 15, 2019
91fbf86
update versioning
mgckind Jun 6, 2019
88419e4
refresh jobs every 2 seconds
mgckind Jun 6, 2019
9282091
more clean up
mgckind Jun 6, 2019
18ad2cb
refresh only when focused on my-Jobs
mgckind Jun 6, 2019
2f72c44
add gitpython to reqs
mgckind Jun 6, 2019
6dd620e
update gitignore
mgckind Jun 6, 2019
869a910
improve logging
mgckind Jun 6, 2019
88c45b7
devulcanized
mgckind Jun 6, 2019
9d556f0
add color to toast
mgckind Jun 7, 2019
3d58966
add version 2 with new options
mgckind Jun 7, 2019
1a986eb
clean up code
mgckind Jun 7, 2019
0cbb7b6
fix paper-toast and query window
mgckind Jun 8, 2019
9a87efd
cutous ui
mgckind Jun 10, 2019
726781b
workign version cutouts
mgckind Jun 10, 2019
66f9d12
update codemirror and query page
mgckind Jun 10, 2019
e7cd783
add y5 tiles
mgckind Jun 10, 2019
50d1b95
update footprint page
mgckind Jun 11, 2019
3ede637
fixing chart
mgckind Jun 11, 2019
8578c23
finding chart fixes
mgckind Jun 11, 2019
3c269e5
fix jlab pages
mgckind Jun 13, 2019
70ae63c
more fixes to find chart
mgckind Jun 13, 2019
5907521
disabling help
mgckind Jun 13, 2019
ebe5b53
remove data-analysis for now
mgckind Jun 13, 2019
34b133f
vulcanized
mgckind Jun 13, 2019
af35756
minor fixes
mgckind Jun 13, 2019
0e7afd7
update code mirror
mgckind Jun 13, 2019
c7b5b3a
fix typo
mgckind Jun 14, 2019
cdd0f62
add commit to finding chart
mgckind Jun 14, 2019
911c2e0
vulcanized
mgckind Jun 14, 2019
8517a03
add coremirror
mgckind Jun 14, 2019
6ddb836
fix interace, myjobs, cutouts
mgckind Jun 14, 2019
e75150f
increase timeout
mgckind Jun 14, 2019
29d40e1
add all files.txt t query job
mgckind Jun 14, 2019
f646f62
fixes in api
mgckind Jun 14, 2019
b59d894
add y6 tiles
mgckind Jun 14, 2019
d733cc6
add y6 tiles
mgckind Jun 14, 2019
52f8807
add y6 tiles
mgckind Jun 14, 2019
ec8deb7
fix connection pubapi
mgckind Jun 14, 2019
52c0610
fix commit
mgckind Jun 15, 2019
ef7fee7
change config file
mgckind Jun 15, 2019
d2dac84
back to 1 proc
mgckind Jun 15, 2019
595f4b0
Merge branch 'jun5' of https://github.com/mgckind/desaccess into jun5
mgckind Jun 15, 2019
187695f
fix logger
mgckind Jun 15, 2019
de0b59d
update y6 tiles
mgckind Jun 17, 2019
5f890ad
Merge branch 'jun5' of https://github.com/mgckind/desaccess into jun5
mgckind Jun 17, 2019
3c27645
add files button
mgckind Jun 17, 2019
169b927
additions
mgckind Jun 17, 2019
fac24f2
Merge branch 'jun5' of https://github.com/mgckind/desaccess into jun5
mgckind Jun 17, 2019
874c4ca
vulcanized
mgckind Jun 17, 2019
3196c5a
update y6 tiles
mgckind Jul 3, 2019
75f6794
Merge pull request #116 from mgckind/jun5
mgckind Jul 30, 2019
614c6d3
update y6 tiles
mgckind Sep 6, 2019
97a071a
add special user gpu deslabs
mgckind Sep 6, 2019
fbc146e
add gpu option to jlab
mgckind Sep 9, 2019
f89ff79
Merge pull request #117 from mgckind/custom-board
mgckind Sep 16, 2019
da413e1
updates footprint page
mgckind Sep 16, 2019
329fb31
add drop-down for releases
mgckind Sep 16, 2019
dcc7e0e
Add custom release for cutouts
mgckind Sep 16, 2019
42cf5ab
fix typo
mgckind Sep 16, 2019
3018a81
vulcanized
mgckind Sep 16, 2019
00ceeb3
modify path for cutouts
mgckind Sep 17, 2019
9970e69
fix table column
mgckind Sep 17, 2019
aa2fcc8
fix table column and data frame
mgckind Sep 17, 2019
91ca6a1
fix cutouts for old format
mgckind Sep 17, 2019
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10 changes: 10 additions & 0 deletions .gitignore
Original file line number Diff line number Diff line change
@@ -1,5 +1,6 @@
__pycache__
*.pyc
.ipynb_checkpoints/
static/workdir/*
easyweb/static/workdir/*
easyweb/static/internal/emails/*
Expand All @@ -17,3 +18,12 @@ venv/
dump.rdb
setup.sh
.access
*.ipynb
chart/
deploy/
kubernetes/
*.sql
easyweb/static/des_components/des-pages/des-my-tables-old.html
easyweb/static/files/
easyweb/static/internal/stats/

2 changes: 1 addition & 1 deletion README.md
Original file line number Diff line number Diff line change
Expand Up @@ -9,7 +9,7 @@
celery multi start worker1 -A ea_tasks --loglevel=info
celery worker -A ea_tasks --loglevel=info -E -c 2
## start server
python3 public.py
python3 deslabs.py



Expand Down
16 changes: 12 additions & 4 deletions Settings.py
Original file line number Diff line number Diff line change
Expand Up @@ -3,9 +3,12 @@
import random
import string
import logging
import yaml
DEBUG = False
DIRNAME = os.path.dirname(__file__)
TOKEN_TTL = 3600
STATIC_PATH = os.path.join(DIRNAME, 'easyweb/static')
URLPATH = 'http://desdr-server.ncsa.illinois.edu/easyweb'
try:
LOG_PATH = os.path.join(DIRNAME, 'logs', os.environ['POD_ID'])
except:
Expand All @@ -15,17 +18,20 @@
os.makedirs(LOG_PATH)
TEMPLATE_PATH = os.path.join(DIRNAME, 'templates')
WORKDIR = os.path.join(STATIC_PATH, "workdir/")
PLTDATA = os.path.join(STATIC_PATH, "plotdata/")
DBFILE = os.path.join(STATIC_PATH, "workdir/admin/users.db")
DBFILE2 = os.path.join(STATIC_PATH, "workdir/admin/users.db")
ROOT_URL = 'https://des.ncsa.illinois.edu'
#ROOT_URL = 'http://localhost:8080'
LOGFILE = os.path.join(LOG_PATH, "access.log")
LOG_GENERALFILE = os.path.join(LOG_PATH, "general.log")
LOG_APPFILE = os.path.join(LOG_PATH, "app.log")
WORKERS = os.path.join(DIRNAME, 'workers')
# TODO: read from file since there will be a race conition between pods
with open('config/ranC.tk', 'r') as fi:
COOKIE_SECRET = fi.readline().strip()
SKEY = fi.readline().strip()
with open('config/desaccess.yaml', 'r') as cfile:
conf = yaml.load(cfile)['secrets']
COOKIE_SECRET = conf['cookie']
SKEY = conf['skey']
# COOKIE_SECRET = ''.join(random.choice(string.ascii_letters + string.digits) for _ in range(16))
# SKEY = ''.join(random.choice(string.ascii_letters + string.digits) for _ in range(16))
formatter = logging.Formatter(fmt='%(asctime)s - %(levelname)-8s - %(message)s',
Expand All @@ -49,7 +55,9 @@
handler_app.setFormatter(formatter)
app_log.addHandler(handler_app)


class dbConfig(object):
def __init__(self):
self.host = 'desdb-dr.ncsa.illinois.edu'
# self.host = 'desdb-dr.ncsa.illinois.edu'
self.host = 'desdb.ncsa.illinois.edu'
self.port = '1521'
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