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Migration of the impc datasets metadata mapper to Airflow. The feat/impc-web-api branch is merged into this branch, but has not been altered. The code was modified to include try_cast operations to handle to differences with the way Spark 4.0 handles null values.

francisco-ebi and others added 21 commits September 18, 2025 13:09
…b_apiimpc_gene_diseases_mapperpy-to-use-airflow

399 migrate impc etljobsloadimpc web apiimpc gene diseases mapperpy to use airflow
…b_apiimpc_batch_query_mapperpy-to-use-airflow

Migrate impc_etl/jobs/load/impc_web_api/impc_batch_query_mapper to use Airflow
…b_apiimpc_gene_search_mapperpy-to-use-airflow

Migrate impc_etl/jobs/load/impc_web_api/impc_gene_search_mapper to use Airflow
…b_apiimpc_idg_mapperpy-to-use-airflow

Migrate impc_etl/jobs/load/impc_web_api/impc_idg_mapper.py to use Airflow
…b_apiimpc_external_links_mapperpy-to-use-airflow

Migrate impc_etl/jobs/load/impc_web_api/impc_external_links_mapper to use Airflow
…mpc-web-api branch is merged into this branch, but has not been altered. The code was modified to include try_cast operations to handle to differences with the way Spark 4.0 handles null values.
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@ficolo ficolo left a comment

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Merge depends on #427

@ficolo ficolo merged commit 4e7de87 into dev Sep 26, 2025
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Migrate impc_etl/jobs/load/impc_web_api/impc_datasets_metadata_mapper.py to use Airflow
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