Skip to content

Issues: mskcc/beagle

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Clear current search query, filters, and sorts
97 Open 241 Closed
97 Open 241 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

Add ACL to Output files
#8 opened Sep 9, 2019 by sivkovic
Implement dryrun Operator Call
#68 opened Dec 24, 2019 by sivkovic
@sivkovic
OperatorFactory should raise a more descriptive Exception
#113 opened Jan 29, 2020 by stevekm
Put reference files in the database in an easily-accessible manner
#120 opened Jan 31, 2020 by stevekm
need method for outputting pipeline CWL input format
#150 opened Feb 24, 2020 by stevekm
Need 'dry run' functionality to output Job JSON and CWL JSON
#162 opened Feb 26, 2020 by stevekm
Improve swagger documentation enhancement New feature or request
#257 opened May 7, 2020 by nikhil
3 tasks
Change URI file handling code in Helix Filters and Roslin QC operators to use FileProcessor enhancement New feature or request
#280 opened May 13, 2020 by allanbolipata
File already exists error reported during initial import due to the same file being reported from IGOLIMS in runs array bug Something isn't working
#299 opened May 16, 2020 by allanbolipata
Add test for ROSLIN operator pairing multiple fastq pairs enhancement New feature or request
#301 opened May 17, 2020 by allanbolipata
@allanbolipata
Pipeline run stuck in CREATING state if one of the reference files are not registered in the database bug Something isn't working
#307 opened May 19, 2020 by allanbolipata
Add deliveryDate field to metadata enhancement New feature or request
#314 opened May 21, 2020 by allanbolipata
Fetch new requests LIMS called one at the time bug Something isn't working
#321 opened May 27, 2020 by sivkovic
@sivkovic
Allow defining multiple notifiers with assignment
#325 opened May 28, 2020 by allanbolipata
Nextflow Run Type enhancement New feature or request
#327 opened May 28, 2020 by sivkovic Nextflow Integration
@sivkovic
Input template (schema) enhancement New feature or request
#328 opened May 28, 2020 by sivkovic
@sivkovic
Automate integration test with mock server using test data for Beagle
#398 opened Jun 18, 2020 by allanbolipata
@nikhil @sivkovic
Create test data set that will be used for helix filters (and other pipeline) drift testing
#475 opened Aug 7, 2020 by allanbolipata
@allanbolipata
AION - return only most recent successful runs for each request Id
#492 opened Aug 19, 2020 by allanbolipata
@allanbolipata
Create Report01 Operator
#537 opened Oct 2, 2020 by allanbolipata 1.23.0
Automatically generate Sample when file is registered
#557 opened Oct 14, 2020 by sivkovic 1.23.0
@sivkovic
Request Callback stay In Voyager state when no files imported
#582 opened Oct 28, 2020 by sivkovic
@sivkovic
ACCESS collapsing unique group IDs in project_id field nice to have This issue would be nice to solve but isn't on our current radar
#598 opened Nov 13, 2020 by ionox0
@ionox0
Question about behavior for writing jsons into /juno/work/ci/voyager/jira/ through notifier help wanted Extra attention is needed
#608 opened Nov 23, 2020 by allanbolipata
SSO for beagle / ridgeback nice to have This issue would be nice to solve but isn't on our current radar
#624 opened Dec 9, 2020 by ionox0
ProTip! Type g i on any issue or pull request to go back to the issue listing page.