Skip to content

Issues: nf-core/modules

Caused by: java.nio.channels.OverlappingFileLockException
#6664 by edmundmiller was closed Nov 18, 2024
Closed 13
Batch module updates - Fall 2024
#5828 opened Jun 18, 2024 by edmundmiller
Open 15
Renovate Dashboard 🤖
#4211 opened Oct 24, 2023 by renovate bot
Open
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

464 Open 1,413 Closed
464 Open 1,413 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

swap to nf-test: bbmap/align update module
#7477 opened Feb 13, 2025 by famosab
3 of 4 tasks
[FEATURE] PoC Nextflow Inspect
#7461 opened Feb 10, 2025 by edmundmiller
new module: PERBASE new module Adding a new module
#7456 opened Feb 10, 2025 by camlloyd
4 tasks done
1
@camlloyd
issues with gprofiler2/gost bug Something isn't working
#7451 opened Feb 7, 2025 by suzannejin
2 tasks done
new module: svtools/vcftobedpe new module Adding a new module
#7448 opened Feb 6, 2025 by nvnieuwk
4 tasks done
@nvnieuwk
[FEATURE] Ensure tabix/bgzip always returns a bgzipped file.
#7444 opened Feb 6, 2025 by charles-plessy
2
new module: rattle/cluster_summary new module Adding a new module
#7442 opened Feb 5, 2025 by chriswyatt1
4 tasks done
@chriswyatt1
new module: rattle/polish new module Adding a new module
#7441 opened Feb 5, 2025 by chriswyatt1
4 tasks done
@chriswyatt1
new module: rattle/correct new module Adding a new module
#7440 opened Feb 5, 2025 by chriswyatt1
4 tasks done
@chriswyatt1
new module: rattle/cluster new module Adding a new module
#7439 opened Feb 5, 2025 by chriswyatt1
4 tasks done
@chriswyatt1
new module: BIOFORMATS2RAW new module Adding a new module
#7422 opened Feb 2, 2025 by camlloyd
4 tasks done
@camlloyd @CaroAMN
new module: hifiadapterfilt
#7390 opened Jan 28, 2025 by Ge94
4 tasks done
1
@Ge94
2
[FEATURE] use arity in freebayes module to allow more than two input files
#7368 opened Jan 25, 2025 by bpow
new module: picard/setnmmdanduqtags new module Adding a new module
#7322 opened Jan 16, 2025 by anoronh4
4 tasks done
@anoronh4
Limit STAR Memory
#7321 opened Jan 16, 2025 by edmundmiller
new module: Portcullis new module Adding a new module
#7310 opened Jan 15, 2025 by jblancoheredia
4 tasks done
@jblancoheredia
1
Investigate star failures on CI with docker_self_hosted bug Something isn't working
#7292 opened Jan 10, 2025 by maxulysse
2 tasks done
Add module edgeR
#7290 opened Jan 10, 2025 by suzannejin
new module: 2FAST2Q
#7288 opened Jan 10, 2025 by afombravo
new module: leafcutter/clusterregtools new module Adding a new module
#7247 opened Dec 18, 2024 by JTL-lab
4 tasks done
new module: leafcutter/differential_splicing new module Adding a new module
#7246 opened Dec 18, 2024 by JTL-lab
4 tasks done
CI: implement smart sharding
#7245 opened Dec 18, 2024 by sateeshperi
@GallVp @sateeshperi
new module: KMA new module Adding a new module
#7242 opened Dec 18, 2024 by Krannich479
6 of 8 tasks
@Krannich479
Parabricks modules need stageInMode 'copy' bug Something isn't working
#7226 opened Dec 16, 2024 by famosab
2 tasks done
new module: VueGen new module Adding a new module
#7204 opened Dec 12, 2024 by sayalaruano
4 tasks done
1
ProTip! Mix and match filters to narrow down what you’re looking for.