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@halexand
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Added functions to ipynb and cleaned up plotting of TSNE plots.

Thoughts: Can one get TSNE to calculate differences etc. based off of the raw distributions of the tetranucleotides? Not sure... just a thought. I might be over thinking things.

@betatim
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betatim commented Apr 25, 2017

What do you have in mind with differences?" TSNE by itself "just" tries to find a way to display data points with N>2 dimensions using only two dimensions.

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3 participants