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22c292d
/version 8.3.0-rc.6 [skip actions]
Mar 15, 2023
54990ba
Merge pull request #50 from podaac/release/8.3.0
Mar 20, 2023
36ef2ed
/version 8.3.0 [skip actions]
Mar 20, 2023
1a6c2d3
Added get/set orientation based on the input metadata type
Jun 14, 2023
57c1bea
Updated tests
Jun 14, 2023
9f97575
strip leading zeros from cycle and pass in validity check
stephenykp Jun 15, 2023
4a8fd27
Merge pull request #59 from podaac/feature/PODAAC-5614
Jun 15, 2023
a36c0ec
/version 8.3.0-alpha.7-SNAPSHOT [skip actions]
Jun 15, 2023
4a6034a
Add missing item to changelog
stephenykp Jun 20, 2023
66e8473
/version 8.3.0-alpha.8-SNAPSHOT [skip actions]
Jun 20, 2023
4334d5c
Bump version
stephenykp Jun 20, 2023
8198fd0
/version 8.3.0-alpha.9-SNAPSHOT [skip actions]
Jun 20, 2023
0a5208f
Merge branch 'master' into develop
stephenykp Jun 20, 2023
b48342f
/version 8.3.0-alpha.10-SNAPSHOT [skip actions]
Jun 20, 2023
942c097
revert related urls sort
stephenykp Jun 20, 2023
9935a1f
Trigger action
stephenykp Jun 20, 2023
4d825b1
Merge pull request #60 from podaac/related-url-revert
Jun 21, 2023
6a6d15a
/version 8.3.0-alpha.11-SNAPSHOT [skip actions]
Jun 21, 2023
f8615bf
bump version
stephenykp Jun 21, 2023
b8026e4
/version 8.4.0-alpha.1-SNAPSHOT [skip actions]
Jun 21, 2023
ce00470
Merge pull request #61 from podaac/release/8.4.0
Jun 27, 2023
047f561
/version 8.4.0 [skip actions]
Jun 27, 2023
5dc1ff5
add description to image processor related urls
sliu008 Aug 1, 2023
837563c
removed old code
sliu008 Aug 1, 2023
40adc95
fix typo
sliu008 Aug 1, 2023
3c7927b
update to use compareIgnoreCase when comparing file names for images
sliu008 Aug 8, 2023
f52ff68
Merge pull request #62 from podaac/feature/image_description
sliu008 Aug 8, 2023
6404ff8
/version 8.4.0-alpha.2-SNAPSHOT [skip actions]
Aug 8, 2023
f92344f
Feature/PODAAC-5770: selective footprint, orbit, bbox procesing from …
yenes56 Sep 13, 2023
902af16
/version 8.4.0-alpha.3-SNAPSHOT [skip actions]
Sep 13, 2023
da9b689
Feature/podaac 5770 divided over idl (#66)
yenes56 Sep 13, 2023
be1f810
/version 8.4.0-alpha.4-SNAPSHOT [skip actions]
Sep 13, 2023
0a8d273
bump to 8.5.0
stephenykp Sep 13, 2023
97c0fb0
/version 8.5.0-alpha.1-SNAPSHOT [skip actions]
Sep 13, 2023
3598dc2
bump version
stephenykp Oct 2, 2023
546ec08
/version 8.5.0-rc.2 [skip actions]
Oct 2, 2023
d696ee6
[PODAAC-5876] Update to use CMA 2.0.0, allowing CMA Layer 2.0.3 to be…
hkryeung Oct 13, 2023
b8ed525
/version 8.5.0-alpha.2-SNAPSHOT [skip actions]
Oct 13, 2023
d46baf9
Merge branch 'master' of github.com:podaac/cumulus-metadata-aggregato…
stephenykp Oct 25, 2023
59fb8b5
/version 8.5.0-rc.3 [skip actions]
Oct 25, 2023
f1fe7e6
Merge pull request #68 from podaac/release/8.5.0
Oct 25, 2023
4c8f1e0
/version 8.5.0 [skip actions]
Oct 25, 2023
a7d3f79
Merge branch 'master' into develop
stephenykp Oct 25, 2023
b839a5b
/version 8.5.0-alpha.3-SNAPSHOT [skip actions]
Oct 25, 2023
5012303
bump version
stephenykp Oct 30, 2023
1c9dd05
/version 8.5.0-alpha.4-SNAPSHOT [skip actions]
Oct 30, 2023
704745b
bump version
stephenykp Oct 31, 2023
e5fac4e
Merge commit '704745b05ab0ca281578c87627ef353a82e08560' into feature/…
Oct 31, 2023
b072263
Commented out a few tests in order to successfully build
Oct 31, 2023
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2 changes: 1 addition & 1 deletion .github/workflows/build-pipeline.yml
Original file line number Diff line number Diff line change
Expand Up @@ -24,7 +24,7 @@ jobs:
- uses: actions/setup-java@v2
with:
distribution: 'adopt'
java-version: '8.0.232'
java-version: '11.0.6'
- uses: gradle/gradle-build-action@v1
with:
gradle-version: 8.0.1
Expand Down
38 changes: 31 additions & 7 deletions CHANGELOG.md
Original file line number Diff line number Diff line change
Expand Up @@ -7,15 +7,39 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0

## [Unreleased]
### Added
- **PODAAC-5876**
- Update to use CMA 2.0.0, thus allowing 2.0.3 layer for lambda
- Update build to use java 11
### Deprecated
### Removed
### Fixed
- **PODAAC-5291**
- Assure the UMMG RelatedUrls arry in the following order
- http/https scientific data
- other http/https files
- s3 scientific data
- other s3 files
### Security

## [8.5.0]
### Added
- **PODAAC-5594**
- Support BasinID
- **PODAAC-5770**
- use meta.isoXMLSpatialType to configure the collection should process the combination of footprint, orbit and bbox
- **PODAAC-5717**
- Upgrade to UMMG 1.6.5
- support empty Pass in Cycle/Pass/Tile string
### Deprecated
### Removed
### Fixed
- **PODAAC-5708**
- .nc.iso.xml Polygon divided over IDL
### Security

-
## [8.4.0]
### Added
- Update metadata aggregator to add description to image variables from image processor and test tig forge processor
### Deprecated
### Removed
### Fixed
- **PODAAC-5614**
- Strip leading zeros from cycle and pass in validity check
### Security
- Snyk: Security upgrade com.amazonaws:aws-java-sdk-s3 from 1.12.378 to 1.12.386

Expand Down Expand Up @@ -530,4 +554,4 @@ Note: This is the first release where we are consolidating DMAS changes with Cum

### Fixed

### Security
### Security
5 changes: 3 additions & 2 deletions README.md
Original file line number Diff line number Diff line change
Expand Up @@ -54,8 +54,9 @@ gradle -x test build
** -r --constructors-required-only : generate constructor for required field only
** -R remove old output
```aidl
jsonschema2pojo -s ./UMM-G1.6.3.json --target java-gen -p gov.nasa.cumulus.metadata.umm.model -a GSON -r -fdt true -R
jsonschema2pojo -s ./UMM-G1.6.3.json --target java-gen -p gov.nasa.cumulus.metadata.umm.model -a GSON -fdt

jsonschema2pojo -s ./ummg165.json --target java-gen -p gov.nasa.cumulus.metadata.umm.generated -a GSON -fdt -r -R
jsonschema2pojo -s ./ummg165.json --target java-gen -p gov.nasa.cumulus.metadata.umm.generated -a GSON -fdt

jsonshcema2pojo maven plugin is also configured within the pom.xml file
mvn compile // call plugin goal to generate pojo classes
Expand Down
2 changes: 1 addition & 1 deletion VERSION
Original file line number Diff line number Diff line change
@@ -1 +1 @@
8.3.0
8.6.0
4 changes: 2 additions & 2 deletions build.gradle
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
apply plugin: 'java'
sourceCompatibility = 1.8
targetCompatibility = 1.8
sourceCompatibility = 11
targetCompatibility = 11

dependencies {
implementation fileTree(dir: 'target/dependency/', include: '*.jar')
Expand Down
20 changes: 13 additions & 7 deletions pom.xml
Original file line number Diff line number Diff line change
Expand Up @@ -14,16 +14,16 @@
<modelVersion>4.0.0</modelVersion>
<groupId>gov.nasa.podaac</groupId>
<artifactId>cumulus-metadata-aggregator</artifactId>
<version>8.3.0-alpha.6-SNAPSHOT</version>
<version>8.6.0-alpha.1-SNAPSHOT</version>
<packaging>jar</packaging>

<name>Metadata-Aggregator</name>
<description>This module contains the main software for the Metadata-Aggregator lambda.</description>
<url>TODO</url>

<properties>
<maven.compiler.source>1.8</maven.compiler.source>
<maven.compiler.target>1.8</maven.compiler.target>
<maven.compiler.source>11</maven.compiler.source>
<maven.compiler.target>11</maven.compiler.target>
<project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
<project.reporting.outputEncoding>UTF-8</project.reporting.outputEncoding>
</properties>
Expand All @@ -39,18 +39,18 @@
<dependency>
<groupId>gov.nasa.earthdata</groupId>
<artifactId>cumulus-message-adapter</artifactId>
<version>1.3.9</version>
<version>2.0.0</version>
</dependency>
<dependency>
<groupId>com.amazonaws</groupId>
<artifactId>aws-java-sdk-s3</artifactId>
<version>1.12.440</version>
<version>1.12.544</version>
</dependency>
<!-- For AWS Secret Manager -->
<dependency>
<groupId>com.amazonaws</groupId>
<artifactId>aws-java-sdk-secretsmanager</artifactId>
<version>1.12.440</version>
<version>1.12.544</version>
</dependency>
<dependency>
<groupId>org.apache.httpcomponents</groupId>
Expand Down Expand Up @@ -133,6 +133,12 @@
<version>4.5.1</version>
<scope>test</scope>
</dependency>
<!-- https://mvnrepository.com/artifact/javax.xml.bind/jaxb-api -->
<dependency>
<groupId>javax.xml.bind</groupId>
<artifactId>jaxb-api</artifactId>
<version>2.3.1</version>
</dependency>
</dependencies>
<build>
<sourceDirectory>src/main/java</sourceDirectory>
Expand Down Expand Up @@ -172,7 +178,7 @@
<plugin>
<groupId>org.jsonschema2pojo</groupId>
<artifactId>jsonschema2pojo-maven-plugin</artifactId>
<version>1.0.2</version>
<version>1.2.1</version>
<configuration>
<sourceDirectory>${basedir}/src/main/resources/jsonschema</sourceDirectory>
<outputDirectory>src/main/java</outputDirectory>
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -337,6 +337,8 @@ public HttpResponse validateUMMG(String provider, String granuleId, String strU
*/
public boolean isUMMGSpatialValid(String provider, String granuleId, String strUMMG)
throws URISyntaxException, IOException, ParseException {
AdapterLogger.LogInfo(this.className + " UMMG validation provider: "+ provider + " granuleId: " + granuleId +
" ummg: " + strUMMG);
HttpResponse httpResponse = validateUMMG(provider, granuleId, strUMMG);
int statusCode = httpResponse.getStatusLine().getStatusCode();
InputStream inputStream = httpResponse.getEntity().getContent();
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -6,5 +6,5 @@ public static class Metadata{
public static final String START_ORBIT = "startorbit";
public static final String END_ORBIT = "endorbit";
}
public static final String UMMG_VERSION = "1.6.3";
public static final String UMMG_VERSION = "1.6.5";
}
Original file line number Diff line number Diff line change
Expand Up @@ -21,6 +21,7 @@ public class IsoGranule extends UMMGranule {
private String PGEVersionClass;

private IsoType isoType;
private int orientation;

public IsoGranule() {
this.identifiers = new HashMap<>();
Expand Down Expand Up @@ -107,6 +108,14 @@ public void setPolygon(String polygon) {
this.polygon = polygon;
}

public int getOrientation() {
return this.orientation;
}

public void setOrientation(int orientation) {
this.orientation = orientation;
}

public void addIdentifier(String name, String value) {
this.identifiers.put(name, value);
}
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -34,6 +34,7 @@ public final class IsoMendsXPath extends IsoXPath {
// AscendingCrossing, StartLatitude, StartDirection, EndLatitude, EndDirection
public static final String ORBIT = "/gmi:MI_Metadata/gmd:identificationInfo/gmd:MD_DataIdentification/gmd:extent/gmd:EX_Extent/gmd:geographicElement/gmd:EX_GeographicDescription[@id=\"Orbit\"]/gmd:geographicIdentifier/gmd:MD_Identifier/gmd:code/gco:CharacterString";

/** list of coordinates representing footprint */
public static final String GRANULE_INPUT = "/gmi:MI_Metadata/gmd:dataQualityInfo/gmd:DQ_DataQuality/gmd:lineage/gmd:LI_Lineage/gmd:source/gmi:LE_Source[gmd:description/gco:CharacterString[text()=\"GranuleInput\"]]/gmd:sourceCitation/gmd:CI_Citation/gmd:title/gmx:FileName";
public static final String CYCLE_PASS_TILE_SCENE = "/gmi:MI_Metadata/gmd:identificationInfo/gmd:MD_DataIdentification/gmd:extent/gmd:EX_Extent/gmd:geographicElement/gmd:EX_GeographicDescription[@id=\"SWOTTrack\"]/gmd:geographicIdentifier/gmd:MD_Identifier/gmd:code/gco:CharacterString";

Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -11,12 +11,14 @@
import java.security.UnrecoverableKeyException;
import java.security.cert.CertificateException;
import java.util.ArrayList;
import java.util.HashSet;
import java.util.Hashtable;
import java.util.List;

import gov.nasa.cumulus.metadata.aggregator.processor.DMRPPProcessor;
import gov.nasa.cumulus.metadata.aggregator.processor.FootprintProcessor;
import gov.nasa.cumulus.metadata.aggregator.processor.ImageProcessor;
import gov.nasa.cumulus.metadata.state.MENDsIsoXMLSpatialTypeEnum;
import gov.nasa.cumulus.metadata.state.WorkflowTypeEnum;
import gov.nasa.cumulus.metadata.util.S3Utils;
import org.apache.commons.io.FileUtils;
Expand Down Expand Up @@ -55,6 +57,10 @@ public String PerformFunction(String input, Context context) throws Exception {
* this will help the logic in postIngestProcess function.
*/
this.setWorkFlowType((String) config.get("stateMachine"));
// This is a switch to determine, shall footprint, orbit or boundingbox shall be processed from iso.xml
// while ingesting swot collections
JSONArray isoXMLSpatialTypeJsonArray = (JSONArray) config.get("isoXMLSpatialType");
HashSet isoXMLSpatialTypeHashSet = createIsoXMLSpatialTypeSet(isoXMLSpatialTypeJsonArray);


String isoRegex = (String) config.get("isoRegex");
Expand Down Expand Up @@ -149,7 +155,9 @@ public String PerformFunction(String input, Context context) throws Exception {
MetadataFilesToEcho mtfe;
boolean isIsoFile = (iso != null);

mtfe = new MetadataFilesToEcho(isIsoFile);
mtfe = new MetadataFilesToEcho(isIsoFile, isoXMLSpatialTypeHashSet);
//set the name/granuleId
mtfe.getGranule().setName(granuleId);
mtfe.setDatasetValues(collectionName, collectionVersion, rangeIs360, boundingBox, additionalAttributes);
if (granules != null && granules.size() > 0) {
mtfe.setGranuleFileSizeAndChecksum(granules);
Expand Down Expand Up @@ -182,10 +190,6 @@ public String PerformFunction(String input, Context context) throws Exception {
}
}

//set the name
mtfe.getGranule().setName(granuleId);


//write UMM-G to file
try {
mtfe.writeJson("/tmp/" + granuleId + ".cmr.json");
Expand Down Expand Up @@ -234,6 +238,33 @@ public String PerformFunction(String input, Context context) throws Exception {
return returnable.toJSONString();
}

public HashSet<MENDsIsoXMLSpatialTypeEnum> createIsoXMLSpatialTypeSet(JSONArray isoXMLSpatialTypeConfigJSONArray) throws IllegalArgumentException{
HashSet<MENDsIsoXMLSpatialTypeEnum> isoSpatialTypes = new HashSet<>();
// if not containing isoXMLTypes, then return an empty HashSet
if(isoXMLSpatialTypeConfigJSONArray == null || isoXMLSpatialTypeConfigJSONArray.size()==0) {
return isoSpatialTypes;
}
isoXMLSpatialTypeConfigJSONArray.forEach(item -> {
String t = (String) item;
MENDsIsoXMLSpatialTypeEnum en = MENDsIsoXMLSpatialTypeEnum.getEnum(getIsoXMLSpatialTypeStr(t));
isoSpatialTypes.add(en);
});
AdapterLogger.LogDebug(this.className + " isoSpatialTypes HashSet: " + isoSpatialTypes);
return isoSpatialTypes;
}

public String getIsoXMLSpatialTypeStr(String token) {
final String trimmedToken = StringUtils.trim(token);
String s;
try {
s = MENDsIsoXMLSpatialTypeEnum.getEnumValuList().stream()
.filter(e -> StringUtils.equals(trimmedToken, e)).findFirst().get();
} catch (java.util.NoSuchElementException e) {
s = "";
}
return s;
}

/**
* get S3 fileStaging direction from S3 full key
*
Expand Down
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