Migrate unit testing classes from omero-common

build.gradle

@@ -38,7 +38,6 @@ ext {
 dependencies {
     testImplementation("org.testng:testng:7.5")
     testImplementation("jmock:jmock:1.+")
-    testImplementation('org.openmicroscopy:omero-common-test:5.7.4')
 
     api('org.openmicroscopy:omero-renderer:5.6.4')
 

src/test/java/ome/testing/CreatePojosFixture.java

@@ -0,0 +1,326 @@
+/*
+ *   Copyright 2006-2014 University of Dundee. All rights reserved.
+ *   Use is subject to license terms supplied in LICENSE.txt
+ */
+
+package ome.testing;
+
+import java.util.ArrayList;
+import java.util.List;
+import java.util.UUID;
+
+import ome.api.IAdmin;
+import ome.api.IQuery;
+import ome.api.IUpdate;
+import ome.model.IObject;
+import ome.model.annotations.DatasetAnnotationLink;
+import ome.model.annotations.ImageAnnotationLink;
+import ome.model.annotations.TagAnnotation;
+import ome.model.annotations.TextAnnotation;
+import ome.model.containers.Dataset;
+import ome.model.containers.DatasetImageLink;
+import ome.model.containers.Project;
+import ome.model.containers.ProjectDatasetLink;
+import ome.model.core.Image;
+import ome.model.meta.Experimenter;
+import ome.model.meta.ExperimenterGroup;
+import ome.system.EventContext;
+import ome.system.Login;
+import ome.system.ServiceFactory;
+import ome.util.ShallowCopy;
+
+/**
+ * setUp and tearDown must be called properly to make these work.
+ * 
+ * @author josh
+ * 
+ */
+public class CreatePojosFixture {
+    /**
+     * creates a new fixture logged in as a newly created user. requires an
+     * admin service factory in order to create user and should NOT be used from
+     * the server side.
+     */
+    public static CreatePojosFixture withNewUser(ServiceFactory sf) {
+        CreatePojosFixture fixture = new CreatePojosFixture();
+
+        IAdmin rootAdmin = sf.getAdminService();
+        String G_NAME = UUID.randomUUID().toString();
+        fixture.g = new ExperimenterGroup();
+        fixture.g.setName(G_NAME);
+        fixture.g.setLdap(false);
+        fixture.g = new ExperimenterGroup(rootAdmin.createGroup(fixture.g),
+                false);
+
+        fixture.TESTER = "TESTER-" + UUID.randomUUID().toString();
+        fixture.e = new Experimenter();
+        fixture.e.setOmeName(fixture.TESTER);
+        fixture.e.setFirstName("Mr.");
+        fixture.e.setLastName("Allen");
+        fixture.e.setLdap(false);
+        fixture.e = new Experimenter(rootAdmin.createUser(fixture.e, G_NAME),
+                false);
+
+        Login testLogin = new Login(fixture.TESTER, "ome", G_NAME, "Test");
+        ServiceFactory factory = new ServiceFactory(testLogin);
+        fixture.setServices(factory);
+
+        fixture.init = true;
+
+        return fixture;
+    }
+
+    private CreatePojosFixture() {
+    }
+
+    /** requires an admin service factory in order to create user. */
+    public CreatePojosFixture(ServiceFactory factory) {
+        setServices(factory);
+        EventContext ec = iAdmin.getEventContext();
+        e = new Experimenter(ec.getCurrentUserId(), false);
+        g = new ExperimenterGroup(ec.getCurrentGroupId(), false);
+        TESTER = ec.getCurrentUserName();
+        init = true;
+    }
+
+    private void setServices(ServiceFactory factory) {
+        iAdmin = factory.getAdminService();
+        iQuery = factory.getQueryService();
+        iUpdate = factory.getUpdateService();
+    }
+
+    protected IAdmin iAdmin;
+
+    protected IQuery iQuery;
+
+    protected IUpdate iUpdate;
+
+    protected boolean init = false;
+
+    protected List<IObject> toAdd = new ArrayList<IObject>(),
+            needId = new ArrayList<IObject>();
+
+    public void createAllPojos() throws Exception {
+        init();
+        projects();
+        datasets();
+        pdlinks();
+        images();
+        dilinks();
+        annotations();
+    }
+
+    public void deleteAllPojos() throws Exception {
+        for (int i = toAdd.size() - 1; i >= 0; i--) {
+            iUpdate.deleteObject(toAdd.get(i));
+        }
+        iAdmin.deleteExperimenter(e);
+        // TODO iAdmin.deleteGroup(g);
+    }
+
+    public void init() {
+        if (!init) {
+            // moved to ctor
+        }
+    }
+
+    public void pdi() {
+        projects();
+        datasets();
+        images();
+        pdlinks();
+        dilinks();
+    }
+
+    public void projects() {
+        init();
+        pr9090 = project(null, "root project without links");
+        pr9091 = project(null, "root project with own annotations");
+        pr9092 = project(null, "root project with foreign annotations");
+        pu9990 = project(e, "user project without links");
+        pu9991 = project(e, "user project with own annotations");
+        pu9992 = project(e, "user project with foreign annotations");
+        saveAndClear();
+    }
+
+    public void datasets() {
+        init();
+        dr7070 = dataset(null, "root dataset without links");
+        dr7071 = dataset(null, "root dataset with own annotations");
+        dr7072 = dataset(null, "root dataset with foreign annotations");
+        du7770 = dataset(e, "user dataset without links");
+        du7771 = dataset(e, "user dataset with own annotations");
+        du7772 = dataset(e, "user dataset with foreign annotations");
+        saveAndClear();
+    }
+
+    // TODO we aren't passing in Experimenter here
+    public void pdlinks() {
+        init();
+        pdlink(pr9091, dr7071);
+        pdlink(pr9092, dr7071);
+        pdlink(pr9091, dr7072);
+        pdlink(pr9092, dr7072);
+
+        pdlink(pu9991, du7771);
+        pdlink(pu9992, du7771);
+        pdlink(pu9991, du7772);
+        pdlink(pu9992, du7772);
+        saveAndClear();
+    }
+
+    public void images() {
+        init();
+        ir5050 = image(null, "");
+        ir5051 = image(null, "");
+        ir5052 = image(null, "");
+        iu5550 = image(e, "");
+        iu5551 = image(e, "");
+        iu5552 = image(e, "");
+        // cgcpaths
+        iu5580 = image(e, "");
+        iu5581 = image(e, "");
+        iu5582 = image(e, "");
+        iu5583 = image(e, "");
+        iu5584 = image(e, "");
+        iu5585 = image(e, "");
+        iu5586 = image(e, "");
+        iu5587 = image(e, "");
+        iu5588 = image(e, "");
+        saveAndClear();
+    }
+
+    public void dilinks() {
+        init();
+        dilink(null, dr7071, ir5051);
+        dilink(null, dr7071, ir5052);
+        dilink(e, dr7072, ir5051);
+        dilink(e, dr7072, ir5052);
+
+        dilink(null, du7771, iu5551);
+        dilink(null, du7771, iu5552);
+        dilink(e, du7772, iu5551);
+        dilink(e, du7772, iu5552);
+        saveAndClear();
+    }
+
+    public void annotations() {
+        init();
+        datasetann(null, dr7071, "roots annotation");
+        datasetann(e, dr7072, "users annotation");
+        datasetann(null, du7771, "roots annotation");
+        datasetann(e, du7772, "users annotation");
+
+        imageann(null, ir5051, "roots annotation");
+        imageann(e, ir5052, "users annotation");
+        imageann(null, iu5551, "roots annotation");
+        imageann(e, iu5552, "users annotation");
+        saveAndClear();
+    }
+
+
+    // ~ Helpers
+    // =========================================================================
+
+    protected <T extends IObject> T push(T obj) {
+        toAdd.add(obj);
+        T copy = new ShallowCopy().copy(obj);
+        copy.unload();
+        needId.add(copy);
+        return copy;
+    }
+
+    protected void saveAndClear() {
+        IObject[] retVal = iUpdate.saveAndReturnArray(toAdd
+                .toArray(new IObject[toAdd.size()]));
+        IObject[] unloaded = needId.toArray(new IObject[needId.size()]);
+        for (int i = 0; i < retVal.length; i++) {
+            unloaded[i].setId(retVal[i].getId());
+        }
+        toAdd.clear();
+        needId.clear();
+    }
+
+    protected Project project(Experimenter owner, String name) {
+        Project p = new Project();
+        p.getDetails().setOwner(owner);
+        p.setName(name);
+        p = push(p);
+        return p;
+    }
+
+    protected Dataset dataset(Experimenter owner, String name) {
+        Dataset d = new Dataset();
+        d.getDetails().setOwner(owner);
+        d.setName(name);
+        d = push(d);
+        return d;
+    }
+
+    protected ProjectDatasetLink pdlink(Project prj, Dataset ds) {
+        ProjectDatasetLink link = new ProjectDatasetLink();
+        link.link(prj, ds);
+        link = push(link);
+        return link;
+    }
+
+    protected Image image(Experimenter e, String name) {
+        Image i = new Image();
+        i.getDetails().setOwner(e);
+        i.setName(name);
+        i = push(i);
+        return i;
+    }
+
+    protected DatasetImageLink dilink(Experimenter user, Dataset ds, Image i) {
+        DatasetImageLink link = new DatasetImageLink();
+        link.link(ds, i);
+        link.getDetails().setOwner(user);
+        link = push(link);
+        return link;
+    }
+
+    protected DatasetAnnotationLink datasetann(Experimenter user, Dataset d,
+            String name) {
+        TextAnnotation dann = new TagAnnotation();
+        dann.setNs(name);
+        dann.getDetails().setOwner(user);
+        DatasetAnnotationLink link = new DatasetAnnotationLink();
+        link.link(d.proxy(), dann);
+        link = push(link);
+        return link;
+    }
+
+    protected ImageAnnotationLink imageann(Experimenter user, Image i,
+            String name) {
+        TextAnnotation iann = new TagAnnotation();
+        iann.setNs(name);
+        iann.getDetails().setOwner(user);
+        ImageAnnotationLink link = new ImageAnnotationLink();
+        link.link(i.proxy(), iann);
+        link = push(link);
+        return link;
+    }
+
+    // static class Data {
+    public String TESTER;
+
+    public Experimenter e;
+
+    public ExperimenterGroup g;
+
+    public Project pr9090, pr9091, pr9092, pu9990, pu9991, pu9992;
+
+    public Dataset dr7070, dr7071, dr7072, du7770, du7771, du7772;
+
+    public Image ir5050, ir5051, ir5052, iu5550, iu5551, iu5552, iu5580,
+            iu5581, iu5582, iu5583, iu5584, iu5585, iu5586, iu5587, iu5588;
+
+    public List<Long> asIdList(IObject... iobjs) {
+        List<Long> list = new ArrayList<Long>();
+        for (IObject i : iobjs) {
+            list.add(i.getId());
+        }
+        return list;
+    }
+}