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15 Open 34 Closed
15 Open 34 Closed
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Issues list

Add the pKa and hydrophobicity index to aminoacid_properties
#65 opened Feb 11, 2025 by aukeheerdink
1
Learn from rustims A-core Area: core structures, traits, and algorithms
#64 opened Feb 10, 2025 by douweschulte
4
Restructure identified peptides A-identification Area: identification
#63 opened Feb 10, 2025 by douweschulte
How to handle ontologies: Dynamically or at compile time? A-core Area: core structures, traits, and algorithms C-maintenance Category: Maintenance
#57 opened Feb 6, 2025 by RalfG
Restructure
#56 opened Feb 6, 2025 by douweschulte
Extend fragment and mass calculation to allow immediately going to Mass instead of going via MoleculaFormula A-core Area: core structures, traits, and algorithms
#55 opened Feb 6, 2025 by douweschulte
Use trait IsAminoAcid A-core Area: core structures, traits, and algorithms
#54 opened Feb 6, 2025 by douweschulte
1
Example results in error A-python Area: python bindings
#52 opened Jan 27, 2025 by LLautenbacher
2
Generalise the alignment score to one peptide against a set of germlines A-align Area: (mass-based) alignments
#24 opened Mar 11, 2024 by douweschulte
Calculate a local score for an annotation A-core Area: core structures, traits, and algorithms A-fragmentation Area: fragmentation and annotation of spectra A-identification Area: identification C-enhancement Category: new feature or request
#23 opened Mar 11, 2024 by douweschulte
Allow isotope annotation A-core Area: core structures, traits, and algorithms
#21 opened Mar 11, 2024 by douweschulte
Support mzPAF and mzSpecLib A-core Area: core structures, traits, and algorithms C-enhancement Category: new feature or request
#20 opened Mar 11, 2024 by douweschulte
Add new identification file formats A-identification Area: identification
#19 opened Mar 8, 2024 by douweschulte
5 of 6 tasks
@aukeheerdink @douweschulte
Consensus for mass based alignment A-align Area: (mass-based) alignments C-enhancement Category: new feature or request
#5 opened Jun 26, 2023 by douweschulte
Support for internal fragments A-core Area: core structures, traits, and algorithms A-fragmentation Area: fragmentation and annotation of spectra C-enhancement Category: new feature or request
#2 opened Jun 22, 2023 by douweschulte
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