Search results

split freebayes

Status: Open.

#31 In sequana/variant_calling;

· cokelaer opened on Feb 27, 2025

implement bwa_split

Status: Open.

#30 In sequana/variant_calling;

· cokelaer opened on Feb 27, 2025

if coverage and snpeff are off, multiqc fails because

Status: Open.

#29 In sequana/variant_calling;

· cokelaer opened on Feb 6, 2025

genome and annotation must have the same basename, error is raised if not

Status: Open.

#28 In sequana/variant_calling;

· cokelaer opened on Jan 30, 2025

in rare occassion genomecov does not sort properly the chromosomes

bugSomething isn't workingSomething isn't working

Status: Open.

#27 In sequana/variant_calling;

· cokelaer opened on Jul 5, 2024

if input is made of BAM, the readtag should be unset

enhancementNew feature or requestNew feature or request

Status: Open.

#26 In sequana/variant_calling;

· cokelaer opened on May 28, 2024

implement better summary

enhancementNew feature or requestNew feature or request

Status: Open.

#3 In sequana/variant_calling;

· cokelaer opened on Jul 8, 2021

consider implementated features found in this reference (strand bias)

enhancementNew feature or requestNew feature or request

Status: Open.

#2 In sequana/variant_calling;

· cokelaer opened on Mar 16, 2021

planned improvements

enhancementNew feature or requestNew feature or request

Status: Open.

#1 In sequana/variant_calling;

· cokelaer opened on Feb 20, 2020