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Cleanup API / models / simulators / estimators / unittests #130

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merged 37 commits into from
Mar 7, 2022
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365bcab
linting using black / isort, fixed imports
picciama Feb 23, 2022
425f0a6
separate properties from input_data
picciama Feb 23, 2022
1535856
major refactoring removing train/models:
picciama Feb 24, 2022
eb1e551
refactoring numpy estimator:
picciama Feb 25, 2022
fd06d26
cleanup: working fitting procedure:
picciama Feb 25, 2022
b25b315
code reformatting with black / isort and linting
picciama Feb 25, 2022
da23c4f
remove unnecessary compute()
picciama Feb 25, 2022
23ee162
add missing decorators
picciama Feb 25, 2022
01a4574
override theta_loc/scale in training
picciama Feb 28, 2022
fd50d5c
unittests cleanup
picciama Mar 1, 2022
d5b0721
support InputDataGLM when simulating
picciama Mar 1, 2022
66fe624
removed @dask_compute
picciama Mar 1, 2022
784c28e
reintroduced compute()
picciama Mar 1, 2022
f1ae683
cleanup, fix imports and syntax errors
picciama Mar 1, 2022
a3cb3c4
fixed imports, api and type annotations using mypy
picciama Mar 1, 2022
8385c87
reformatting using black
picciama Mar 1, 2022
c186b3d
cleanup using flake8, mypy, black, isort
picciama Mar 1, 2022
2e2c755
added type hints everywhere / fixed mypy issues
picciama Mar 3, 2022
cfaf056
reformatting using black / isort
picciama Mar 3, 2022
04d0e5f
Merge branch 'development' into mp/integrate_simulator
picciama Mar 3, 2022
6a76eb8
reformatting using black / isort
picciama Mar 3, 2022
611e2af
corrected data utils import
picciama Mar 4, 2022
dc63263
better documentation for simuation functions
picciama Mar 4, 2022
b493b54
refactored modelContainer.py -> model_container,py
picciama Mar 4, 2022
12e5909
make model_container attribute in parent estimator
picciama Mar 4, 2022
3767ea4
flake8 / black / isort reformatting
picciama Mar 4, 2022
bd4a619
bugfix: correctly set attribute model_container
picciama Mar 4, 2022
408f83b
bugfix: generate -> generate_artificial_data
picciama Mar 4, 2022
89f1d84
added plotting submodule
picciama Mar 4, 2022
64f53ff
reformatted using black
picciama Mar 4, 2022
6c6d84f
added plotting library
picciama Mar 4, 2022
c0e6cdf
reformatted using black / isort
picciama Mar 4, 2022
00d0dcd
also check python 3.7
picciama Mar 4, 2022
18ebb90
removed python 3.7
picciama Mar 4, 2022
5396eaa
updated numpy to >=1.22.2 to pass safety checks
picciama Mar 4, 2022
6e68734
remove python 3.7
picciama Mar 4, 2022
6048230
fix flake8-bandit issue with newest version:
picciama Mar 4, 2022
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corrected data utils import
picciama committed Mar 4, 2022
commit 611e2afcb1db7c768bd14edc2d1e85ff71b40e4b
2 changes: 1 addition & 1 deletion batchglm/api/__init__.py
Original file line number Diff line number Diff line change
@@ -1,3 +1,3 @@
from .. import __version__, pkg_constants
from ..log_cfg import logger, setup_logging, unconfigure_logging
from . import data, models, train, typing, utils
from . import models, train, typing, utils