devVI

Integration of developmental scRNA-seq data. Inspired by scPoli.

Getting started

Please refer to the documentation, in particular, the API documentation.

You need to have Python 3.10 or newer installed on your system. If you don't have Python installed, we recommend installing uv.

There are several alternative options to install devVI:

pip install git+https://github.com/theislab/devVI.git@main

If you found a bug, please use the issue tracker.

t.b.a

Name	Name	Last commit message	Last commit date
Latest commit le-ander add codecov token Apr 14, 2025 b51ad31 · Apr 14, 2025 History 44 Commits
.github	.github	add codecov token	Apr 14, 2025
.vscode	.vscode	lint	Apr 4, 2025
docs	docs	💚 Fix docs build	Mar 11, 2025
src/devvi	src/devvi	add tests and fix edgecases in model	Apr 8, 2025
tests	tests	add tests and fix edgecases in model	Apr 8, 2025
.codecov.yaml	.codecov.yaml	add configs	Mar 3, 2025
.cruft.json	.cruft.json	lint	Apr 4, 2025
.editorconfig	.editorconfig	add configs	Mar 3, 2025
.gitignore	.gitignore	do not ignore vscode	Apr 4, 2025
.pre-commit-config.yaml	.pre-commit-config.yaml	[pre-commit.ci] pre-commit autoupdate (#5 )	Apr 9, 2025
.readthedocs.yaml	.readthedocs.yaml	add configs	Mar 3, 2025
CHANGELOG.md	CHANGELOG.md	init	Mar 2, 2025
LICENSE	LICENSE	init	Mar 2, 2025
README.md	README.md	Typo	Mar 26, 2025
biome.jsonc	biome.jsonc	migrate biome config	Apr 4, 2025
pyproject.toml	pyproject.toml	Update template to v0.5.0 (#4 )	Apr 3, 2025