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Install scvelo from github
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Signed-off-by: zethson <[email protected]>
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Zethson committed Nov 28, 2024
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3 changes: 3 additions & 0 deletions .github/workflows/run_notebooks.yml
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Expand Up @@ -34,5 +34,8 @@ jobs:
- name: Install ehrapy and additional dependencies
run: uv pip install --system . cellrank nbconvert ipykernel

- name: Install scvelo from Github
run: uv pip install --system git+https://github.com/theislab/scvelo.git

- name: Run ${{ matrix.notebook }} Notebook
run: jupyter nbconvert --to notebook --execute ${{ matrix.notebook }}

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