Skip to content
Merged
Show file tree
Hide file tree
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
257 changes: 257 additions & 0 deletions vortex-geo/src/extension/coordinate.rs
Original file line number Diff line number Diff line change
@@ -0,0 +1,257 @@
// SPDX-License-Identifier: Apache-2.0
// SPDX-FileCopyrightText: Copyright the Vortex contributors

//! Coordinate building blocks for geometry extension types: the `Struct<x, y[, z][, m]>` storage
//! of non-nullable `f64` fields, its [`Dimension`], and the decoded [`Coordinate`] value.
//!
//! The coordinate fields are:
//! - `x` — longitude or easting
//! - `y` — latitude or northing
//! - `z` (optional) — elevation
//! - `m` (optional) — measure: an arbitrary per-point value such as distance along a route or a
//! timestamp

use std::fmt::Display;
use std::fmt::Formatter;

use vortex_array::ArrayRef;
use vortex_array::ExecutionCtx;
use vortex_array::arrays::ExtensionArray;
use vortex_array::arrays::PrimitiveArray;
use vortex_array::arrays::StructArray;
use vortex_array::arrays::extension::ExtensionArrayExt;
use vortex_array::arrays::struct_::StructArrayExt;
use vortex_array::dtype::DType;
use vortex_array::dtype::FieldNames;
use vortex_array::dtype::Nullability;
use vortex_array::dtype::PType;
use vortex_array::scalar::Scalar;
use vortex_error::VortexResult;
use vortex_error::vortex_bail;
use vortex_error::vortex_ensure;
use vortex_error::vortex_err;

/// Coordinate dimensions, matching GeoArrow. Field order is fixed: `x`, `y`, then `z` before `m`.
#[derive(Debug, Clone, Copy, PartialEq, Eq)]
pub(crate) enum Dimension {
/// 2D: `x`, `y`.
Xy,
/// 3D with elevation: `x`, `y`, `z`.
Xyz,
/// 3D with a measure: `x`, `y`, `m`.
Xym,
/// 4D: `x`, `y`, `z`, `m`.
Xyzm,
}

impl Dimension {
/// Recover the dimension from a coordinate's field names, in GeoArrow order.
pub(crate) fn from_field_names(names: &FieldNames) -> VortexResult<Dimension> {
let mut strs = [""; 4];
vortex_ensure!(
names.len() <= strs.len(),
"not a valid GeoArrow coordinate dimension: {names:?}"
);
for (slot, name) in strs.iter_mut().zip(names.iter()) {
*slot = name.as_ref();
}
Ok(match &strs[..names.len()] {
["x", "y"] => Dimension::Xy,
["x", "y", "z"] => Dimension::Xyz,
["x", "y", "m"] => Dimension::Xym,
["x", "y", "z", "m"] => Dimension::Xyzm,
_ => vortex_bail!("not a valid GeoArrow coordinate dimension: {names:?}"),
})
}
}

/// A decoded coordinate. `z`/`m` are `Some` iff the storage dimension includes them.
///
/// This is the native value produced when unpacking a [`Point`](crate::extension::Point) scalar;
/// the rest of the coordinate machinery is crate-internal.
#[derive(Debug, Clone, Copy, PartialEq)]
pub struct Coordinate {
/// The x (longitude/easting) ordinate.
pub x: f64,
/// The y (latitude/northing) ordinate.
pub y: f64,
/// The optional `z` (elevation) ordinate.
pub z: Option<f64>,
/// The optional `m` (measure) ordinate.
pub m: Option<f64>,
}

impl Coordinate {
/// A 2D coordinate (`z`/`m` unset).
pub fn xy(x: f64, y: f64) -> Self {
Coordinate {
x,
y,
z: None,
m: None,
}
}
}

impl Display for Coordinate {
fn fmt(&self, fmt: &mut Formatter<'_>) -> std::fmt::Result {
match (self.z, self.m) {
(None, None) => write!(fmt, "POINT({} {})", self.x, self.y),
(Some(z), None) => write!(fmt, "POINT Z ({} {} {})", self.x, self.y, z),
(None, Some(m)) => write!(fmt, "POINT M ({} {} {})", self.x, self.y, m),
(Some(z), Some(m)) => write!(fmt, "POINT ZM ({} {} {} {})", self.x, self.y, z, m),
}
}
}

/// Validate that `dtype` is a coordinate struct of non-nullable `f64` fields, returning its
/// [`Dimension`]. Any of the four GeoArrow dimensions validates.
pub(crate) fn coordinate_dimension(dtype: &DType) -> VortexResult<Dimension> {
let DType::Struct(fields, _) = dtype else {
vortex_bail!("coordinate storage must be a Struct, was {dtype}");
};
for (name, field) in fields.names().iter().zip(fields.fields()) {
vortex_ensure!(
matches!(
field,
DType::Primitive(PType::F64, Nullability::NonNullable)

Copy link
Copy Markdown
Contributor

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

I thought that two fields are Nullable?

Copy link
Copy Markdown
Contributor Author

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

z/m are optional fields (per dimension), not nullable ones — the GeoArrow spec requires coordinate fields to be non-nullable, with "only the outer level allowed to have nulls". So a point can be missing entirely, but a present point can't have a null ordinate.

Ref: https://geoarrow.org/format.html

Copy link
Copy Markdown
Contributor

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

oh maybe you should make it Struct<x, y, ?z, ?m> instead, I forgot that ? also means possibly null, not just optional. Or you can do Struct<x, y, {z}, {m}>

),
"coordinate field {name} must be non-nullable f64, was {field}"
);
}
Dimension::from_field_names(fields.names())
}

/// Decode a [`Coordinate`] from a coordinate `Struct<x, y[, z][, m]>` scalar (`z`/`m` read iff
/// present, so the same decoder serves every dimension).
pub(crate) fn coordinate_from_struct(scalar: &Scalar) -> VortexResult<Coordinate> {
let fields = scalar.as_struct();
let required = |name: &str| -> VortexResult<f64> {
f64::try_from(
&fields
.field(name)
.ok_or_else(|| vortex_err!("coordinate missing {name}"))?,
)
};
let optional = |name: &str| -> VortexResult<Option<f64>> {
fields
.field(name)
.map(|value| f64::try_from(&value))
.transpose()
};
Ok(Coordinate {
x: required("x")?,
y: required("y")?,
z: optional("z")?,
m: optional("m")?,
})
}

/// Decode a [`Coordinate`] from an extension-typed point scalar (unwrapped to its coordinate
/// storage) or a bare coordinate `Struct` scalar. The per-row decode used by the distance fns.
pub(crate) fn coordinate_from_scalar(scalar: &Scalar) -> VortexResult<Coordinate> {
match scalar.as_extension_opt() {
Some(ext_scalar) => coordinate_from_struct(&ext_scalar.to_storage_scalar()),
None => coordinate_from_struct(scalar),
}
}

/// Validated, executed `x`/`y` columns of a point array. The bulk counterpart to [`Coordinate`];
/// `z`/`m` are not executed.
pub(crate) struct ParsedCoordinates {
/// The flat `f64` `x` column.
pub(crate) xs: PrimitiveArray,
/// The flat `f64` `y` column.
pub(crate) ys: PrimitiveArray,
}

/// Validate a point column's coordinate storage (layout and non-nullability) and execute its
/// `x`/`y` columns.
pub(crate) fn parse_storage(
points: &ArrayRef,
ctx: &mut ExecutionCtx,
) -> VortexResult<ParsedCoordinates> {
let storage = points
.clone()
.execute::<ExtensionArray>(ctx)?
.storage_array()
.clone()
.execute::<StructArray>(ctx)?;
coordinate_dimension(storage.dtype())?;
vortex_ensure!(
!storage.dtype().is_nullable(),
"coordinate storage must be non-nullable to read unmasked ordinates, was {}",
storage.dtype()
);
let xs = storage
.unmasked_field_by_name("x")?
.clone()
.execute::<PrimitiveArray>(ctx)?;
let ys = storage
.unmasked_field_by_name("y")?
.clone()
.execute::<PrimitiveArray>(ctx)?;
Ok(ParsedCoordinates { xs, ys })
}

#[cfg(test)]
mod tests {
use vortex_array::IntoArray;
use vortex_array::VortexSessionExecute;
use vortex_array::arrays::ExtensionArray;
use vortex_array::arrays::PrimitiveArray;
use vortex_array::arrays::StructArray;
use vortex_array::dtype::FieldNames;
use vortex_array::dtype::extension::ExtDType;
use vortex_array::session::ArraySession;
use vortex_array::validity::Validity;
use vortex_error::VortexResult;
use vortex_session::VortexSession;

use super::Coordinate;
use super::parse_storage;
use crate::extension::GeoMetadata;
use crate::extension::Point;

/// Display emits WKT, including `z`/`m` when present.
#[test]
fn display_is_wkt() {
let coordinate = |z, m| Coordinate {
x: 1.0,
y: 2.0,
z,
m,
};
assert_eq!(coordinate(None, None).to_string(), "POINT(1 2)");
assert_eq!(coordinate(Some(3.0), None).to_string(), "POINT Z (1 2 3)");
assert_eq!(coordinate(None, Some(4.0)).to_string(), "POINT M (1 2 4)");
assert_eq!(
coordinate(Some(3.0), Some(4.0)).to_string(),
"POINT ZM (1 2 3 4)"
);
}

/// [`parse_storage`] reads the coordinate fields unmasked, so a nullable point column must
/// be rejected at parse time rather than decoding null rows as garbage ordinates.
#[test]
fn parse_rejects_nullable_points() -> VortexResult<()> {
let session = VortexSession::empty().with::<ArraySession>();
let mut ctx = session.create_execution_ctx();

let storage = StructArray::try_new(
FieldNames::from(["x", "y"]),
vec![
PrimitiveArray::from_iter(vec![1.0f64]).into_array(),
PrimitiveArray::from_iter(vec![2.0f64]).into_array(),
],
1,
Validity::AllValid,
)?
.into_array();
let dtype = ExtDType::<Point>::try_new(GeoMetadata { crs: None }, storage.dtype().clone())?;
let points = ExtensionArray::new(dtype.erased(), storage).into_array();

assert!(parse_storage(&points, &mut ctx).is_err());
Ok(())
}
}
3 changes: 3 additions & 0 deletions vortex-geo/src/extension/mod.rs
Original file line number Diff line number Diff line change
@@ -1,10 +1,13 @@
// SPDX-License-Identifier: Apache-2.0
// SPDX-FileCopyrightText: Copyright the Vortex contributors

pub(crate) mod coordinate;
mod point;
mod wkb;

use std::fmt::Display;

pub use point::*;
pub use wkb::*;

/// Extension metadata that is common to all the geospatial extension types.
Expand Down
Loading
Loading