Implemented ipSAE calculation and display in boltz_ph#6
Open
profdocpizza wants to merge 3 commits intoyehlincho:mainfrom
Open
Implemented ipSAE calculation and display in boltz_ph#6profdocpizza wants to merge 3 commits intoyehlincho:mainfrom
profdocpizza wants to merge 3 commits intoyehlincho:mainfrom
Conversation
…/IPSAE/blob/main/ipsae.py for boltz_ph/pipeline.py Specifically: ipSAE d0res min value as it was found to be most correlated with binding (doi: https://doi.org/10.1101/2025.08.14.670059).
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Implemented ipSAE d0res min based on https://doi.org/10.1101/2025.02.10.637595
This metric has been found to be correlated with binding (https://doi.org/10.1101/2025.08.14.670059)