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SU(3) support#44

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Commits on Jan 19, 2023

• support for the .h5 format for output files. I've set un a test program in test/

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Commits on Jan 20, 2023

• I wrote 2 test programs from generating and dumping .h5 files.

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Commits on Jan 22, 2023

• ++ and -- interpolators are now built according to the notation of eq. 14 of https://arxiv.org/pdf/hep-lat/9804008.pdf. They are the same as before, no previous result needs to be changed

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• better format and input file options of the glueball interpolators and correlators

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• I wrote a python script that converts the glueball interpolators to a format more easily readable by hadron.

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Commits on Jan 23, 2023

• modified: hadron/glueball.py

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Commits on Jan 25, 2023

• modified: CMakeLists.txt

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Commits on Jan 27, 2023

• written documentation for the glueball.py script and adjusted the documentation folder structure

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• Merge branch 'h5_format' of github.com:urbach/su2 into h5_format

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• wrong factor in gauge derivative

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• better theoretical understanding of the missing factor in the gradient flow evolution

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• accidentally removed factor 2

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Commits on Jan 30, 2023

• check that the loaded gauge configuration is of the correct size.

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• implementing open boundary conditions.

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Commits on Feb 1, 2023

• implemented spatial open boundary conditions for the HMC evolution.

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Commits on Feb 3, 2023

• hmc output: "E*A" problematic to read with hadron

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Commits on Feb 13, 2023

• now the obc condition is the same as in the Tensor Network

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• testing: solved memory leaks with Valgrind. Previous runs unaffected.

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Commits on Feb 14, 2023

• support for custom plaquette measure

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• - hmc output.data : plaquette with specified bc

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Commits on Feb 15, 2023

• DO NOT MERGE

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Commits on Feb 16, 2023

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• implemented the adjointsu3 class

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• debugging

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Commits on Feb 17, 2023

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• fact_k missing for v vector

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• to do: check line 78 of exp_gauge.cc

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Commits on Feb 18, 2023

• still debugging, get_deriv not implemented yet

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Commits on Feb 21, 2023

• DO NOT MERGE

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• better file structure + added some comments about the implementation

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Commits on Feb 24, 2023

• clearer definition and use of accum types

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• fixed get_deriv

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Commits on Feb 25, 2023

• plaquette measure: spatial only supported

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Commits on Mar 7, 2023

• Merge pull request #43 from urbach/su3

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• Merge pull request #45 from urbach/boundary_conditions

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• solved #42

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• Revert "back to su3"

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• Merge pull request #46 from urbach/revert-45-boundary_conditions

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Commits on Mar 10, 2023

• merge to boundary_conditions overwrote the support for the spatial plaquette omeas.

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Commits on Mar 15, 2023

• consistent use of nstep in MCMC and offline measurements runs

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Commits on May 19, 2023

• patch: potential omeasurements were not saved

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Commits on May 22, 2023

• Additional patch for potential: filename is set once before measurements start ,either in mcmc or hmc, or in measure.

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• Merge pull request #48 from christianegross/su3

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Commits on May 24, 2023

• added script for measuring the anisotropy via gradient flow

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• Merge branch 'su3' of github.com:christianegross/su2 into su3

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Commits on Jun 9, 2023

• R script analysis: new script for fit xiyey

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• Merge branch 'su3' of https://github.com/urbach/su2 into su3

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Commits on Jul 19, 2023

• script for finding x0 given y0: f(x0) = y0

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Commits on Jul 21, 2023

• R routine for fitting a function f: R^n \to R with errors on both x and y

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• (see previous commit)

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Commits on Jul 24, 2023

• Merge branch 'su3' of github.com:urbach/su2 into su3

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• updated documentation: omeas plaquette

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Commits on Aug 3, 2023

• gradient flow measure: using subdirectory

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• small change in test:

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Commits on Aug 8, 2023

• formatting the gradient flow omeas in the hadron format

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• subdir parameter for the gradient flow online measurements

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• Merge branch 'su3' of https://github.com/urbach/su2 into su3

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• Merge branch 'su3' of https://github.com/urbach/su2 into su3

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Commits on Sep 25, 2023

• python scripts in the hadron folder

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• testing the routine:

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• fixed a bug (multivariable case)

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Commits on Oct 18, 2023

• fixed bug: output.data was overwritten when restarting a run.

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• creation of output.data is done only for MC runs

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• Merge branch 'su3' of github.com:urbach/su2 into su3

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Commits on Nov 6, 2023

• printing absolute path when loading configuration

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• implementing restart condition for omeas

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• implemented restart condtion for omeas

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Commits on Jan 10, 2024

• first implementation of heatbath+overrelaxation. checking against metropolis

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• Merge branch 'su3' of github.com:urbach/su2 into su3

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Commits on Jan 11, 2024

• corrected typo in heatbath: normalization constant "A"

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• minor changes, still trying to match heatbath+overrelax. with metropolis

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• cleaner omp parallel for in heatbath

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• solved the mismatch with metropolis

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Commits on Jan 12, 2024

• seeding of engines before sweep changed:

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• printing the acceptance rates for the heatbath+overrelaxation

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• conceptually simpler seed initialization for each thread

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• implemented Hattori-Nakajima method for heathbath and overrelaxation: https://arxiv.org/pdf/hep-lat/9210016v1.pdf

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• Revert "seeding of engines before sweep changed:"

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• Merge branch 'su3_heatbath_overrelaxation' of github.com:urbach/su2 into su3_heatbath_overrelaxation

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Commits on Jan 15, 2024

• corrected heatbath sweep: generate new links until the proposal is accepted

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• added possibility to do several overrelaxation sweeps per heatbath sweep

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• also calculate temporal acceptance rate

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Commits on Jan 19, 2024

• fixed convention for normalizing Re(Tr(P_{\mu \nu})) in the output

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• new feature: custom number of heatbath sweeps

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Commits on Jan 22, 2024

• fixed seeding of engines for multiple heatbath sweeps: now new seeds for each sweep.

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• fix normalisation of acceptance rate for heatbath

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Commits on Jan 23, 2024

• n_heatbath > 1: simpler initialization of the seeds

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• fixed call to do_heatbath()

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• minor change

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Commits on Jan 24, 2024

• implemented possibility of additional temporal-only heatbath and overrelaxation sweeps.

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• seeds reproducible independent of number of threads.

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Commits on Jan 25, 2024

• remove parameter N_hit from heatbath

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Commits on Jan 26, 2024

• add possibility to print out average change of link in heatbath

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• save mean of absolute value of link change, not mean of link change itself

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Commits on Jan 30, 2024

• written documentation in quarto

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• doumentation: added references to index

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Commits on Jan 31, 2024

• scripts for reading Wilson loops and measuring r0

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• ported uwerr primary from hadron

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Commits on Feb 1, 2024

• bootstrap samples routines

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• heatbath and overrelaxation require updates of all links, not just temporal

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• fixed typo in output line

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• remnants of (wrong) temporal-only updates

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• Merge branch 'su3_heatbath_overrelaxation' of github.com:urbach/su2 into su3_heatbath_overrelaxation on Christiane's Laptop

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• remove some merge conflicts

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• more sensible restart condition syntax

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Commits on Feb 2, 2024

• Merge branch 'su3_heatbath_overrelaxation' of github.com:urbach/su2 into su3_heatbath_overrelaxation on Christianes laptop

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• fix additional leftover from merge conflict

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• in metropolis and heatbath, set maximum number of threads to T.

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• Merge pull request #50 from urbach/su3_heatbath_overrelaxation

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Commits on Feb 10, 2024

• testing the r0 analysis scripts

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• bootstrap sampling routine

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Commits on Feb 11, 2024

• nicer plots

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Commits on Feb 13, 2024

• experiments with staggered Dirac operator

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• working test with det(D) and ublas

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Commits on Feb 14, 2024

• typo in fit of the effective curve

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• Merge branch 'su3' of https://github.com/urbach/su2 into su3

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• jackknife sampling routines

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• jackknife variance

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Commits on Feb 23, 2024

• sampling scripts: creating uwerr output directory if not existing

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Commits on Mar 12, 2024

• support for cosh and sinh in eff. mass scripts

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Commits on Mar 28, 2024

• effective mass with backward signal

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Commits on Apr 4, 2024

• fatal error outside namespace

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Commits on Apr 9, 2024

• new scripts for the analysis

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Commits on Apr 10, 2024

• analysis and gevp

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Commits on Apr 11, 2024

• uncorrelated bts sampling in 1 line of code

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Commits on Apr 15, 2024

• fixing error with even odd sites

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Commits on Aug 28, 2024

• Merge branch 'su3' of github.com:urbach/su2 into su3

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Commits on Sep 4, 2024

• measurements for potential: reduce number of necessary file accesses.

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