SU(3) support

.gitignore

@@ -27,12 +27,15 @@
 *.app
 # emacs
 *~
+*#*#
 # others
 *.dat
 *.json
 core
 su2
 su2hmc
+# python cache files
+*__pycache__*
 
 # non-text files from the documentation
 *.Rhistory
@@ -41,4 +44,10 @@ su2hmc
 .vscode/*
 
 # build directories
-build*
+build*
+
+## documentation
+doc/.quarto
+doc/_book
+doc/_freeze
+doc/*.html

CMakeLists.txt

@@ -39,6 +39,7 @@ configure_file(
 
   include_directories(${CMAKE_SOURCE_DIR}/)
   include_directories(${CMAKE_SOURCE_DIR}/include/)
+  include_directories(${CMAKE_SOURCE_DIR}/fermions/)
   include_directories(${CMAKE_BINARY_DIR}/generated/)
 
 
@@ -51,7 +52,6 @@ configure_file(
   set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} ${OpenMP_CXX_FLAGS} -D_USE_OMP_")
 
   find_package(yaml-cpp)
-
   include_directories(${YAML_CPP_INCLUDE_DIR} ${YAML_CPP_INCLUDE_DIR}/yaml-cpp/)
 
   find_package(xtl)
@@ -60,6 +60,13 @@ configure_file(
   find_package(xtensor)
   include_directories(${xtensor_INCLUDE_DIRS} ${xtensor_INCLUDE_DIRS}/xtensor/)
 
+
+  if(${HIGHFIVE_FORMAT})
+    find_package(HighFive REQUIRED)
+  endif()
+
+  find_package (Eigen3 3.3 REQUIRED NO_MODULE)
+
 # We could just have two `add_executable` blocks listing almost all source
 # files. However, CMake would then compile the source files twice, once for
 # each executable. The rationale is that different flags can be used for
@@ -84,30 +91,62 @@ endif()
 set(${CMAKE_BINARY_DIR} ${CMAKE_INSTALL_PREFIX}/bin/)
 add_executable(u1-main main-u1.cpp)
 add_executable(su2-main main-su2.cpp)
+add_executable(su3-main main-su3.cpp)
 
 add_executable(su2-kramers kramers.cc)
 add_executable(test-groups test.cc)
 add_executable(scaling scaling.cc)
 add_executable(try tryreduce.cc)
 
+set(test_progs "links" "smearing" "yaml" "dirac")
+
+if(${HIGHFIVE_FORMAT})
+  set(test_progs ${test_progs} "h5-gen" "h5-dump")
+endif()
+
+set(test_progs_fullname "")
+foreach(target ${test_progs})
+  add_executable(test-${target}.exe test/${target}.cpp)
+  list(APPEND test_progs_fullname test-${target}.exe) # now FOO="a;b"
+endforeach(target)
+
+
+target_link_libraries(test-yaml.exe ${YAML_CPP_LIBRARIES})
+
+foreach(target ${test_progs_fullname})
+  if(${HIGHFIVE_FORMAT})
+    target_link_libraries(${target} HighFive)
+  endif()
+endforeach(target)
+
+
 target_link_directories(${CMAKE_PROJECT_NAME} PUBLIC ${YAML_CPP_LIBRARY_DIR})
 
-foreach(target u1-main su2-main su2-kramers test-groups scaling try)
+foreach(target u1-main su2-main su3-main su2-kramers test-groups scaling try ${test_progs_fullname})
+  target_link_libraries(${target} su2 ${YAML_CPP_LIBRARIES})
   target_link_libraries(${target} su2 ${YAML_CPP_LIBRARIES})
 
   if(Boost_FOUND)
     target_link_libraries(${target} su2 ${Boost_LIBRARIES})
   else()
     target_link_libraries(${target} su2 "-lboost_program_options -lboost_filesystem -lboost_system")
   endif()
+
+  target_link_libraries (${target} Eigen3::Eigen)
+
 endforeach(target)
 
 # installing 
 
 install(TARGETS ${PROJECT_NAME}
     LIBRARY DESTINATION ${CMAKE_INSTALL_LIBDIR}
 )
-install(TARGETS u1-main su2-main)
+install(TARGETS u1-main su2-main su3-main)
 install(TARGETS su2-kramers test-groups scaling try)
 
+# tests
+
+foreach(target ${test_progs})
+  install(TARGETS test-${target}.exe LIBRARY DESTINATION ${CMAKE_INSTALL_LIBDIR})
+endforeach(target)