Merge pull request #20 from centre-for-microbiome-research/snakemake_… #64
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| name: check hpc_script | |
| on: [push] | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: ["3.8"] | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Check mqsub --dry-run | |
| run: | | |
| python3 bin/mqsub --dry-run -- echo 'Hello world' | |
| - name: Check mqstat | |
| run: | | |
| python3 bin/mqstat --help | |
| - name: Check mqwait | |
| run: | | |
| python3 bin/mqwait --help | |
| - name: Check mpermissions | |
| run: | | |
| python3 bin/mpermissions --help | |
| - name: Check mqcreate | |
| run: | | |
| python3 bin/mcreate --help | |
| - name: Check filename_tree_splitter | |
| run: | | |
| python3 bin/filename_tree_splitter -n 5 --names HelloWorld | |
| # - name: Check filename_tree_unsplitter | |
| # run: | | |
| # python3 bin/filename_tree_unsplitter | |