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add queue nodes to disk report on ssh
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sternp committed Nov 29, 2023
1 parent d5356ef commit e57d195
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2 changes: 1 addition & 1 deletion bin/crontab
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*/10 * * * * bash /work/microbiome/sw/hpc_scripts/bin/check_disk
*/10 * * * * bash /work/microbiome/sw/hpc_scripts/bin/check_disk >/dev/null 2>&1
5 changes: 5 additions & 0 deletions cmr_bashrc_extras.bash
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Expand Up @@ -41,6 +41,11 @@ case $- in *i*) echo "** cl5n006 disk usage (%): `cat /work/microbiome/cl5n006_d
case $- in *i*) echo "** cl5n007 disk usage (%): `cat /work/microbiome/cl5n007_disk_usage` **"; esac
case $- in *i*) echo "** cl5n008 disk usage (%): `cat /work/microbiome/cl5n008_disk_usage` **"; esac
case $- in *i*) echo "** cl5n009 disk usage (%): `cat /work/microbiome/cl5n009_disk_usage` **"; esac
case $- in *i*) echo "** cl5n010 disk usage (%): `cat /work/microbiome/cl5n010_disk_usage` **"; esac
case $- in *i*) echo "** cl5n011 disk usage (%): `cat /work/microbiome/cl5n011_disk_usage` **"; esac
case $- in *i*) echo "** cl5n012 disk usage (%): `cat /work/microbiome/cl5n012_disk_usage` **"; esac
case $- in *i*) echo "** cl5n013 disk usage (%): `cat /work/microbiome/cl5n013_disk_usage` **"; esac


# Setup snakemake config directories so it interfaces well with the PBS system
mkdir -p ~/.config/snakemake
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