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42 changes: 42 additions & 0 deletions .github/workflows/build_and_gtest.yml
Original file line number Diff line number Diff line change
@@ -0,0 +1,42 @@
name: Build and Test

on:
push:
branches:
- main
- gtest
pull_request:
branches:
- main
- gtest

jobs:
build-and-test:
runs-on: ubuntu-latest

steps:
- name: Checkout code
uses: actions/checkout@v3

- name: Update Libraries
run: sudo apt-get update

- name: Install dependencies
run: |
sudo apt-get install -y cmake g++ libgtest-dev libarmadillo-dev libopenblas-dev libsuperlu-dev libeigen3-dev
# Build and install Google Test (if not pre-installed)
cd /usr/src/googletest && sudo cmake . && sudo make && sudo make install

- name: Create build directory
run: mkdir build

- name: Run CMake
run: cmake -S . -B build

- name: Build library
run: cmake --build build

- name: Run tests
run: |
cd build
make run_tests
8 changes: 4 additions & 4 deletions CMakeLists.txt
Original file line number Diff line number Diff line change
Expand Up @@ -10,9 +10,9 @@ message(STATUS "Detected CXX Compiler ID: ${CMAKE_CXX_COMPILER_ID}")
# Compiler-specific CXX_FLAGS and linker flags
if (CMAKE_CXX_COMPILER_ID STREQUAL "AppleClang")
set(CMAKE_CXX_FLAGS "-O3 -Xclang -fopenmp -DARMA_DONT_USE_WRAPPER -DARMA_USE_SUPERLU")
set(CMAKE_EXE_LINKER_FLAGS "${CMAKE_EXE_LINKER_FLAGS} -L/usr/local/Cellar/libomp/19.1.6/lib -lomp")
set(CMAKE_EXE_LINKER_FLAGS "${CMAKE_EXE_LINKER_FLAGS} -L/usr/local/opt/libomp/lib -lomp")
message(STATUS "Using AppleClang-specific flags.")
include_directories("/usr/local/Cellar/libomp/19.1.6/include")
include_directories("/usr/local/opt/libomp/include")
else()
set(CMAKE_CXX_FLAGS "-O3 -fopenmp -DARMA_DONT_USE_WRAPPER -DARMA_USE_SUPERLU")
set(CMAKE_EXE_LINKER_FLAGS "${CMAKE_EXE_LINKER_FLAGS}")
Expand Down Expand Up @@ -74,8 +74,8 @@ else()
endif()

find_package(Eigen3 3.3.7 REQUIRED)
find_library(OpenBLAS_LIBRARIES NAMES openblas blas PATHS "/usr/lib/x86_64-linux-gnu" REQUIRED)
find_library(LAPACK_LIBRARY lapack REQUIRED PATHS "/usr/lib" "/usr/lib/x86_64-linux-gnu" "/usr/local/lib" "/usr/local/Cellar/")
find_library(OpenBLAS_LIBRARIES NAMES openblas blas PATHS "/usr/lib/x86_64-linux-gnu" "/usr/local/opt/" REQUIRED)
find_library(LAPACK_LIBRARY lapack REQUIRED PATHS "/usr/lib" "/usr/lib/x86_64-linux-gnu" "/usr/local/lib" "/usr/local/opt/")

# Required libraries and link settings
set(LINK_LIBS ${ARMADILLO_LIBRARIES}
Expand Down
1 change: 1 addition & 0 deletions src/cpp/utils.cpp
Original file line number Diff line number Diff line change
Expand Up @@ -15,6 +15,7 @@
*
*/


/*
* @file utils.cpp
* @brief Helpers for sparse operations and MATLAB analogs
Expand Down
17 changes: 15 additions & 2 deletions tests/cpp/CMakeLists.txt
Original file line number Diff line number Diff line change
@@ -1,15 +1,28 @@
# tests_C++ Configuration
# Include directories for the source code
include_directories("${CMAKE_SOURCE_DIR}/src/cpp")

# FetchContent module to download and configure Google Test
include(FetchContent)

# Download and install Google Test
FetchContent_Declare(
googletest
URL https://github.com/google/googletest/archive/refs/heads/main.zip
)

# Set up the fetched content
FetchContent_MakeAvailable(googletest)

# Find all test*.cpp files
file(GLOB TEST_SOURCES test*.cpp)

set(TEST_EXECUTABLES "")

# Create test executables and link with Google Test
foreach(TEST_SOURCE ${TEST_SOURCES})
get_filename_component(TEST_NAME ${TEST_SOURCE} NAME_WE)
add_executable(${TEST_NAME} ${TEST_SOURCE})
target_link_libraries(${TEST_NAME} PUBLIC mole_C++ ${LINK_LIBS})
target_link_libraries(${TEST_NAME} PUBLIC mole_C++ gtest gtest_main ${LINK_LIBS})
list(APPEND TEST_EXECUTABLES ${TEST_NAME})
endforeach()

Expand Down
38 changes: 16 additions & 22 deletions tests/cpp/test1.cpp
Original file line number Diff line number Diff line change
@@ -1,32 +1,26 @@
/**
* Nullity test of Divergence operator
*/

#include "mole.h"
#include <iostream>
#include <gtest/gtest.h>

void run_nullity_test(int k, Real tol) {
int m = 2 * k + 1;
Real dx = 1;
int m = 2 * k + 1;
Real dx = 1;

Divergence D(k, m, dx);
vec field(m + 1, fill::ones);
Divergence D(k, m, dx);
vec field(m + 1, fill::ones);

vec sol = D * field;
vec sol = D * field;

if (norm(sol) > tol) {
cout << "\033[1;31mTest FAILED!\033[0m\n";
exit(1);
}
EXPECT_NEAR(norm(sol), 0, tol);
}

int main() {
Real tol = 1e-10;

for (int k : {2, 4, 6})
run_nullity_test(k, tol);

cout << "\033[1;32mTest PASSED!\033[0m\n";
TEST(DivergenceTests, Nullity) {
Real tol = 1e-10;
for (int k : {2, 4, 6}) {
run_nullity_test(k, tol);
}
}

return 0;
int main(int argc, char **argv) {
::testing::InitGoogleTest(&argc, argv);
return RUN_ALL_TESTS();
}
36 changes: 12 additions & 24 deletions tests/cpp/test2.cpp
Original file line number Diff line number Diff line change
@@ -1,33 +1,21 @@
/**
* Nullity test of Gradient operator
*/

#include "mole.h"
#include <iostream>
#include <gtest/gtest.h>

void run_nullity_test(int k, Real tol) {
int m = 2 * k + 1;
Real dx = 1;
int m = 2 * k + 1;
Real dx = 1;

Gradient G(k, m, dx);
vec field(m + 2, fill::ones);
Gradient G(k, m, dx);
vec field(m + 2, fill::ones);

vec sol = G * field;
vec sol = G * field;

if (norm(sol) > tol) {
cout << "\033[1;31mTest FAILED!\033[0m\n";
cout << norm(sol);
exit(1);
}
ASSERT_LT(norm(sol), tol) << "Gradient Nullity Test failed for k = " << k;
}

int main() {
Real tol = 1e-10;

for (int k : {2, 4, 6, 8})
run_nullity_test(k, tol);

cout << "\033[1;32mTest PASSED!\033[0m\n";

return 0;
TEST(GradientTests, Nullity) {
Real tol = 1e-10;
for (int k : {2, 4, 6, 8}) {
run_nullity_test(k, tol);
}
}
35 changes: 12 additions & 23 deletions tests/cpp/test3.cpp
Original file line number Diff line number Diff line change
@@ -1,32 +1,21 @@
/**
* Nullity test of Laplacian operator
*/

#include "mole.h"
#include <iostream>
#include <gtest/gtest.h>

void run_nullity_test(int k, Real tol) {
int m = 2 * k + 1;
Real dx = 1;
int m = 2 * k + 1;
Real dx = 1;

Laplacian L(k, m, dx);
vec field(m + 2, fill::ones);
Laplacian L(k, m, dx);
vec field(m + 2, fill::ones);

vec sol = L * field;
vec sol = L * field;

if (norm(sol) > tol) {
cout << "\033[1;31mTest FAILED!\033[0m\n";
exit(1);
}
ASSERT_LT(norm(sol), tol) << "Laplacian Nullity Test failed for k = " << k;
}

int main() {
Real tol = 1e-10;

for (int k : {2, 4, 6})
run_nullity_test(k, tol);

cout << "\033[1;32mTest PASSED!\033[0m\n";

return 0;
TEST(LaplacianTests, Nullity) {
Real tol = 1e-10;
for (int k : {2, 4, 6}) {
run_nullity_test(k, tol);
}
}
56 changes: 22 additions & 34 deletions tests/cpp/test4.cpp
Original file line number Diff line number Diff line change
@@ -1,47 +1,35 @@
/**
* Energy test
*/

#include "mole.h"
#include <gtest/gtest.h>
#include <algorithm>
#include <iostream>

int main() {

int k = 4;
Real a = -5;
Real b = 5;
int m = 500;
vec grid = linspace(a, b, m);
Real dx = grid(1) - grid(0);
Real tol = 1e-10;
TEST(EnergyTests, EigenvalueTest) {
int k = 4;
Real a = -5;
Real b = 5;
int m = 500;
vec grid = linspace(a, b, m);
Real dx = grid(1) - grid(0);
Real tol = 1e-10;

Laplacian L(k, m - 2, dx);
Laplacian L(k, m - 2, dx);

std::transform(grid.begin(), grid.end(), grid.begin(),
[](Real x) { return x * x; });
std::transform(grid.begin(), grid.end(), grid.begin(),
[](Real x) { return x * x; });

sp_mat V(m, m);
V.diag(0) = grid;
sp_mat V(m, m);
V.diag(0) = grid;

sp_mat H = -0.5 * (sp_mat)L + V;
sp_mat H = -0.5 * (sp_mat)L + V;

cx_vec eigval;
eig_gen(eigval, (mat)H);
cx_vec eigval;
eig_gen(eigval, (mat)H);

eigval = sort(eigval);
eigval = sort(eigval);

vec expected{1, 3, 5, 7, 9};
vec expected{1, 3, 5, 7, 9};

bool failed = false;
for (int i = 0; i < expected.size(); ++i)
if (std::norm(real(eigval(i) / eigval(0)) - expected(i)) > tol) {
cout << "\033[1;31mTest FAILED!\033[0m\n";
failed = true;
for (int i = 0; i < expected.size(); ++i) {
ASSERT_LT(std::norm(real(eigval(i) / eigval(0)) - expected(i)), tol)
<< "Energy Test failed for eigenvalue index " << i;
}

if (!failed)
cout << "\033[1;32mTest PASSED!\033[0m\n";

return 0;
}
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