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create and apply test dataset - #33

Merged

antoniasaracco merged 35 commits into

nf-core:devfrom

antoniasaracco:create_test_dataset

Jun 23, 2026

Commits on Jun 18, 2026
- create and apply test dataset
  antoniasaracco
  committed
  6eff885
- separate minimal test profile and full test profile
  antoniasaracco
  committed
  7ebf53e
- update snapshot
  antoniasaracco
  committed
  ebf569d
- fix: run prettier
  antoniasaracco
  committed
  4d7e3c8
- Remove fastqc
  delfiterradas
  committed
  f9abbf7
- Stage whole directory instead of individual files to keep path structures
  delfiterradas
  committed
  a4651fe
- Add checksum column and adapt samplesheet channel
  delfiterradas
  committed
  7ea3853
- Modify shasum to work with multiple files
  delfiterradas
  committed
  47f68bd
Commits on Jun 19, 2026
- Merge branch 'create_test_dataset' into compare_checksum
  antoniasaracco
  authored
  b1695e4
- Merge pull request #1 from delfiterradas/compare_checksum
  antoniasaracco
  authored
  7a88e5e
- include test full
  antoniasaracco
  committed
  4976eb9
- remove debug print
  antoniasaracco
  committed
  a0543f1
- fix schema
  antoniasaracco
  committed
  a26b66b
- create main_full snapshot
  zxBIB
  committed
  b14919e
- update default snapshot
  zxBIB
  committed
  f628854
Commits on Jun 22, 2026
- remove pipeline tag
  antoniasaracco
  committed
  5444dd7
- fix: use test data base path param
  antoniasaracco
  committed
  8c73c57
Commits on Jun 23, 2026
- fix test_data base path
  antoniasaracco
  committed
  44499b9
- remove debug print
  antoniasaracco
  committed
  d4e0a4b
- update test_full test
  antoniasaracco
  committed
  9ba6d19
- make validation columns optional
  antoniasaracco
  committed
  a2922fe
- fix samplesheet input path
  antoniasaracco
  committed
  00c6505
- remove md5 test file
  antoniasaracco
  committed
  f2114d4
- replace for original samplesheet
  antoniasaracco
  committed
  7d62585
- update default snapshot
  antoniasaracco
  committed
  bff43f7
- Merge branch 'create_test_dataset' of https://github.com/antoniasaracco/datasync into create_test_dataset
  antoniasaracco
  committed
  aff6ef7
- run pre commit
  antoniasaracco
  committed
  e6ce004
- update default snapshot
  antoniasaracco
  committed
  68e00d2
- update test data base paht in schema
  antoniasaracco
  committed
  24acf68
- update snapshot
  antoniasaracco
  committed
  128044c
- update default snapshot
  antoniasaracco
  committed
  f02371f
- ignore md5 and sha unstable results
  antoniasaracco
  committed
  0b468d0
- fix: add new line at the end of file
  antoniasaracco
  committed
  8a3e5d6
- update shasum module
  antoniasaracco
  committed
  27e038c
- fix: update shasum input
  antoniasaracco
  committed
  dd9afc4

Commits

Commits on Jun 18, 2026

Commits on Jun 19, 2026

Commits on Jun 22, 2026

Commits on Jun 23, 2026